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Name : trd_0522 (trd_0522) Accession : YP_002521768.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : spermidine/putrescine transport system permease potB Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 518911 - 519825 bp Length : 915 bp Strand : - Note : identified by match to protein family HMM PF00528 DNA sequence : ATGAGCGCCATCGACCGTGTACGAGTCCAAGAGCGTTCCCTCGGCTGGCACGAGCGCGCCAGTGAGCGGATCCGGCAAAG CGAAAGAGTGCGCGCTCTCTTCCTCGCCGGGCCAGGCGGTTTGTGGCTCCTCCTGTTCTTCTTGTTACCGACAGCCATCG TGTTCGCCTACAGTTTCGCTCGCCGCGGCCCCTATGGAGCGGTAGCCTGGGCTTTCACGCTGGAGAACTACGCGCGCTTG TTCGACTGGCTGTACATTCGAGTCTTTCTCATGTCGGTTTGGCTCGCCTTGCTCACCACGGTCATTTGTCTCGTCATCGG TTATCCCTTCGCCTTCGTCATCGCCCGGAGTCCACGCCGCTGGCGCAACGCACTCCTCGTCCTCGTCCTGATCCCGTTCT GGACGAACTTTCTGGTGCGCACCTATGCCATCATGCTCCTCTTGCGCGCTGACGGGCTCATCAACAACGCGCTGCAGTGG CTGGGGCTGATCGATCGTCCTCTCTCTCTGCTCTTCACCCCCTTCGCCGTCGTGCTCGGTCTCGTCTACGGCTATCTTCC CTTCATGATCCTACCGATCTATGCATCGATCGAGAAGTTCGACTTCACGCTGGTCGAGGCTGCACAGGATCTCGGTGCGA ATGCGTGGCACGTCTTCTGGCGCGTCCTGCTTCCTCTTACGCTTCCTGGTGTTCTCGCTGGCTCGATTCTCGTCTTCATT CCGTCAGTCGGTGCCTTCGTGACCCCTGACTTGCTCGGGGGCGGCAAGGTAGTCATGATCGCCAATCTGATCAATCAGCA GTTCCTGACCGTGCGACACTGGCCCTTCGGTTCAGCGATTTCGTTCGTCTTGATGGCGATCGTTCTCGCAGCGACCATGC TCTACTTCCGAATCGGGGAGACGCGGCGGATATGA Protein sequence : MSAIDRVRVQERSLGWHERASERIRQSERVRALFLAGPGGLWLLLFFLLPTAIVFAYSFARRGPYGAVAWAFTLENYARL FDWLYIRVFLMSVWLALLTTVICLVIGYPFAFVIARSPRRWRNALLVLVLIPFWTNFLVRTYAIMLLLRADGLINNALQW LGLIDRPLSLLFTPFAVVLGLVYGYLPFMILPIYASIEKFDFTLVEAAQDLGANAWHVFWRVLLPLTLPGVLAGSILVFI PSVGAFVTPDLLGGGKVVMIANLINQQFLTVRHWPFGSAISFVLMAIVLAATMLYFRIGETRRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 9e-51 | 48 |
