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Name : smpB (trd_0238) Accession : YP_002521493.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 248683 - 249165 bp Length : 483 bp Strand : + Note : identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086 DNA sequence : ATGAGCAAGGGAACAGCCAAGAGCCGCGAGGGCGAAAAGGTCATCGCGGTCAACCGTAAGGCGTACCACGACTATTTCAT CGAAGAAGAGTTGGAGGCGGGCATCCAGCTCACCGGCTCGGAGATCAAGTCGATCCGGGCTGGGCGTGTCAACCTCCGCG ATGCCTACGCGCGCATCGAGGACGGTGAACTCTGGCTCATCGGTATGCATGTCAGCCCGTATCCGGGTGCCAGTGGGAAG CACCAGCACGATCCGACGCGTCCGCGCAAACTGCTGGTGCACAAGCGGGAGCTAGACTATCTCCGCGGCAAGCTGGAAAA GCGTGGGTATACGCTCGTGCCGCTCCGGCTGGTCATCCGTCGGGGCTTGGCCAAGATCGATCTCGGCCTGGCGCGCGGCA AGAAGCAGTACGACAAGCGCGAGGCGATCGCCGAGCGGGAGGCGCGGCGCGAGATCGAGCGGGCGATCAGCCCACGGTGG TGA Protein sequence : MSKGTAKSREGEKVIAVNRKAYHDYFIEEELEAGIQLTGSEIKSIRAGRVNLRDAYARIEDGELWLIGMHVSPYPGASGK HQHDPTRPRKLLVHKRELDYLRGKLEKRGYTLVPLRLVIRRGLAKIDLGLARGKKQYDKREAIAEREARREIERAISPRW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-26 | 53 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-24 | 49 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-23 | 46 |
