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Name : trd_1825 (trd_1825) Accession : YP_002523024.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase aldh Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1835659 - 1837164 bp Length : 1506 bp Strand : - Note : identified by match to protein family HMM PF00171 DNA sequence : ATGACGACCGAAACCGGAATTCGCACCTACGGTCTGCTCATCGACGGCCAGTTCGTCCCCGCCGCGAGCGGTGAGACGTT CCCGACCTACAATCCGGCGACGAACGAGGTCATCGGCTACGTCGCCAGGGCGAGTCGGGAGGATGTCGACCGTGCGGTCC GCGCAGCCCGTCGTGCCTTCGACGAAGGCCCTTGGGGGCGTATGACGCCCAACGAGCGGGCCCGCCGCTTGCGCCGTGTC GCCGAGATCCTCCGTGAGCGCGTCGACGAACTCGCGCGTCTGGAGACGCTGAACTGCGGGAAGATCATCGTCGAGTCGCG GATGGACATCTTGTCTGCCGCCAACTGCTTCGACTATTACGCCAACCTGACAGGTCAGATCTGGGGCGAGACGATCCCGA TGAACGGACCGCTCCTCGACTACACGGTTCGCGAACCGTACGGGGTGTGCGGACAGATCATTCCCTGGAACTTCCCCATC CTCATGGCCGCATGGAAACTGGCACCGGCACTCGCGGCCGGAAATACGGTCGTTCTCAAGCCTGCCAGCTATACCCCGAT CACCGCGCTCATCCTGGGGCAGATCTGCCTCGAAGCCGGTATCCCTGAAGGCGTTGTCAACGTCGTGACGGGGCCGGGCA GCGAGGTCGGTGCCGCGATCTGCGAGCACCCGCTGGTCGACAAGATCGCCTTCACCGGCGAGACGGAGACCGGTCGCGAG ATCTTGCGCCTGAGTGCGGGGACGATCAAGAAGGTTTCCCTCGAACTCGGTGGCAAGTCGCCGAACATCGTCTTCCCGGA CGCCGACCTCGAAGAGGCGGTCAACGGCTCGCTGTTCGCTATCTTCACCAATGCGGGTCAGCGCTGCACGGCACGTACGC GTCTCCTGCTGCACGAGTCGATCCATGATCAGTTCATGGATCTCTTTCTGCGCAAGGCATCCGCTCTGCGGATCGGTGAC CCGTTGGATGAGCGCACCCAGCTCGGTCCGTTGGTCTCGCGCCGACAGTGCGAGCGCGTCCTGAGCTATGTCGAGCGCGC CAAGGCGGAAGGGGCTGCGCTCCGCTTGGGTGGGAAGCGGCCGGACGACCCGGTGCTCCAGCGCGGGAACTTCGTCGAGC CGACGATTTTCGACGAGGTGCAGCCCCAGATGACGATCGCCCGCGAGGAAGTCTTCGGTCCGGTGCTCGCCGTCATTCCG TTCCGCACCGAGGACGAGGCGGTCGAGATCGCCAATGCGACGATCTACGGGCTCGCTGCCACGATCTGGACGAACGACAT CAAGCGGGCACATCGCTTGGCGGCGCGGATCAAGGCCGGCAACATCAGCATCAACTATCCCGTCGTCAATCCACCGGAGG CCCCCTTCGGCGGCTTCAAGCAGAGCGGTATCGGGCGGGAACTGTCGCGGCACGCGCTCGACCTCTACACGCAGGTCAAG AATGTCGTCGTGGGGTTGAGCGAACAACGCTTCGACTGGTACGGAAACTGGCCACCTGGACGGTGA Protein sequence : MTTETGIRTYGLLIDGQFVPAASGETFPTYNPATNEVIGYVARASREDVDRAVRAARRAFDEGPWGRMTPNERARRLRRV AEILRERVDELARLETLNCGKIIVESRMDILSAANCFDYYANLTGQIWGETIPMNGPLLDYTVREPYGVCGQIIPWNFPI LMAAWKLAPALAAGNTVVLKPASYTPITALILGQICLEAGIPEGVVNVVTGPGSEVGAAICEHPLVDKIAFTGETETGRE ILRLSAGTIKKVSLELGGKSPNIVFPDADLEEAVNGSLFAIFTNAGQRCTARTRLLLHESIHDQFMDLFLRKASALRIGD PLDERTQLGPLVSRRQCERVLSYVERAKAEGAALRLGGKRPDDPVLQRGNFVEPTIFDEVQPQMTIAREEVFGPVLAVIP FRTEDEAVEIANATIYGLAATIWTNDIKRAHRLAARIKAGNISINYPVVNPPEAPFGGFKQSGIGRELSRHALDLYTQVK NVVVGLSEQRFDWYGNWPPGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-72 | 47 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-69 | 44 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 9e-70 | 44 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 9e-70 | 44 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 9e-70 | 44 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-69 | 44 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 3e-76 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| trd_1825 | YP_002523024.1 | aldehyde dehydrogenase aldh | VFG0082 | Protein | 8e-70 | 44 |
