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Name : serS (trd_1742) Accession : YP_002522941.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1746722 - 1748059 bp Length : 1338 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACCTCAGGCTGATCCGAGAGCATCCGGACCTGGTGCGCGAGGCCTTGCGCAAGCTCAATACCGAGGCTCCGCT CGACGAGATCCTGGAACTCGACGAGCGACGTCGCCAGCTGGTCGCTGAAGTCGAGCAGCTCAAGGCTCAACGCAACGCCG AGTCCAAGCGGATCGGCCAGTTGCCAGCTGGGCCGGAGCGGGAAGCCACCATCGCCGCCATGCGTGCACTCGGCGACCGA ATCGAGGCACTCGACCGCGAACTCGCCGCGATCGAAGAGCGGCTCCAGGCGCTGCTCTTGGAGGTTCCCAACCTGCCCGA TCCCGATGTTCCCGTCGGCCCCGATGAAAGTGGCAACGTCGTCGTGCGTCACTGGGGAGAACCGCGACCGTTCGACTTCC CGGTCAAGCCGCACTGGGAACTGGCGGAGGAGCTCGGGCTGATCGATTTCGCCCGCGGAGTCAAGATCGCGGGGAGTCGC TTCTACGTGCTCCGCGGTGATCTCGCGCGGCTCCAGCGCGCCCTCATCGCCTGGATGATCGATCTCCACGTCAACGAGCA TGGGTATTTGGAAGTCTATCCGCCGTTCCTCGTCCGCCGCGAGGCGATGATCGGGACGGGAAATCTCCCGAAGTTCGGGG ACAATCTCTATCACGACGAGGAAACCGATCTCTGGCTGATTCCCACCGCTGAGGTGCCCGTTACCAATCTCTTCCGCGAC GAAATCCTCCCGCCGGGTTCGCTCCCCATCTATCTCGTCGCGGCTACTCCTTGCTTCCGCAAGGAGAGAGTCTCAGCCGG CCGCGATGTACGCGGAATCAAGCGCGTCCATCAGTTCGAGAAGGTGGAGATGGTCAAGTTCGTCGAGCCGGATCGCTCTG ACGAGGAACTCCAGCGACTCGTCGCTGATGCCGAAGACGTGTTGCGCCGGCTGGAACTTCCCTACCGTGTCGTCCAAATG TGCACTGGTGATCTTTCCTTCACGGCAGCCAAGAAGTTCGATCTCGAGGTCTGGGCACCTGGCTCCCAGGAGTGGCTGGA GGTCTCGTCCTGCTCGAATTTCCGCGACTTCCAGGCCAGACGGGCCAATATCCGCTACCGGCCGAGCGAGGGAGCACGCC CCCAGTTCGTGCACACGCTCAACGGATCGGGACTCGCTCTCCCCCGGACACTCATCGCGATCATGGAAAACTACCAGCAG CCAGATGGGACGATCGAGATCCCAGCTGTCTTGCGCCCCTACATGGGTGGGCAACAGCGGATCGGCCGACAACCAGCTTA TTGGGAACCAGCGCAGGCACGGCGCGCCCGCGAGCAGGCTCGGGCGGGGGACTCGTGA Protein sequence : MLDLRLIREHPDLVREALRKLNTEAPLDEILELDERRRQLVAEVEQLKAQRNAESKRIGQLPAGPEREATIAAMRALGDR IEALDRELAAIEERLQALLLEVPNLPDPDVPVGPDESGNVVVRHWGEPRPFDFPVKPHWELAEELGLIDFARGVKIAGSR FYVLRGDLARLQRALIAWMIDLHVNEHGYLEVYPPFLVRREAMIGTGNLPKFGDNLYHDEETDLWLIPTAEVPVTNLFRD EILPPGSLPIYLVAATPCFRKERVSAGRDVRGIKRVHQFEKVEMVKFVEPDRSDEELQRLVADAEDVLRRLELPYRVVQM CTGDLSFTAAKKFDLEVWAPGSQEWLEVSSCSNFRDFQARRANIRYRPSEGARPQFVHTLNGSGLALPRTLIAIMENYQQ PDGTIEIPAVLRPYMGGQQRIGRQPAYWEPAQARRAREQARAGDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-104 | 51 |
