Gene Information

Name : fabG (trd_1621)
Accession : YP_002522823.1
Strain : Thermomicrobium roseum DSM 5159
Genome accession: NC_011959
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.1.1.100
Position : 1616064 - 1616813 bp
Length : 750 bp
Strand : -
Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR01830

DNA sequence :
ATGAGCGGAGAACGCGGAGCAGCGATCGTGACCGGTGCCGTTCGTGGGATCGGTCGTGCGACCGCGCTGCGGTTGGCCCG
AGACGGCTTCAAGGTCGTCGTCAATTACCGCGGCGACGAGGCGCTGGCACAGGCGCTCGTCGAGGAAATTCAGGCGGCTG
GCGGAACCGCCATCGCTTTCCGAGCCGACGTGACGGATCCAGAGCAAGTGGGCGCCATGGTGCAGGCGGCTATCGACCAG
TTCGGCCGTCTGGATGCGCTCGTCAACAATGCCGGGATCACGCGCGATACGCTCCTCTTGCGTATGCGGGACGAGGACTG
GCACGCCGTCCTCGAGACGAACTTGACGAGCGTCTTCTATTGCTGCCGCGCGGCTCTGCGGCCGATGCTGCGCCAGCGCT
ATGGACGCATCGTCAATCTCTCCTCCGTATCCGGGCTCATCGGGAACATCGGGCAGACCAACTACGCGGCGGCCAAGGCC
GGCATCATCGGCTTCAGCAAGGCGCTCGCCCGCGAAGTGGCGAGCCGCGGCATCACCGTTAACGTCGTCGCTCCCGGATT
CATTCAGACGCGCCTCACCGAAGCCTTACCGGCCGAACTCCAGCAAAAACTCCTCGAGCAGATCCCGATAGGCTTTTACG
GCACACCCGAGGACGTCGCCGAGGCGATCGCCTTCCTCGTCTCGCCGGGGGCACGGTACATCACGGGAGCTGTCCTGGCT
GTCGATGGCGGGCTCACCATGGCATCGTGA

Protein sequence :
MSGERGAAIVTGAVRGIGRATALRLARDGFKVVVNYRGDEALAQALVEEIQAAGGTAIAFRADVTDPEQVGAMVQAAIDQ
FGRLDALVNNAGITRDTLLLRMRDEDWHAVLETNLTSVFYCCRAALRPMLRQRYGRIVNLSSVSGLIGNIGQTNYAAAKA
GIIGFSKALAREVASRGITVNVVAPGFIQTRLTEALPAELQQKLLEQIPIGFYGTPEDVAEAIAFLVSPGARYITGAVLA
VDGGLTMAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-22 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-27 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-27 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-28 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-28 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 7e-29 41