|
Name : glnA (trd_1558) Accession : YP_002522760.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1538062 - 1539510 bp Length : 1449 bp Strand : - Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGTACGGGTCGTGCACATCGCCAGAACACGTTCTCGATCTGATCCGGTCACGTGGTATCCAGATCGTCGATTTGCGCTT TACGGATCTTCCCGGCACGTGGCAGCATGCGTCGCTGCCAGCGAGCCAGCTCAGCTTGGCCGATTTCGAGCGCGGCATCG GCTTCGATGGTTCGAGTATCCGCGGTTTCCAGGCCATCGAAGAAAGCGACATGTTGCTCGTTCCTGACCCGACGACGGCC TTCATCGATCCGTTCGCGGCTGTCCCGACTCTGGTCATGATTTGTAACGTCGTCGATCCGGAGACGCGTCAACCGTATGC GCGTGATCCGCGCTACGTTGCCCAGAAAGCCGAGCGATACCTGCGCGATCTGGGGATCGCCGACACGAGTTTCTGGGGAC CGGAAATCGAGTTTTTCATTTTTGACCACGTCAGTTACGAGGTCTTGCCCTATCGCATGGGCTTCGCGATCGACTCGCGT GAAGGGTACTGGAACAGTGGTCGCAACGACGGGACGCCGAATCTCGGCTATACCATCCGCCCCAAGGAGGGATACTTCCC AGCTCCTCCTCACGATACCTTTCAGGACATCCGCAGCGAGGCGGCGTTGCTCCTCGAGCAGATCGGTGTTCCCGTCGAGA TGCACCATCACGAAGTCGCGACCGCTGGCCAAGGCGAGATCGACATGCGGCGCGATACGTTGACTGCCATGGCCGACAAG GTGATGATCTACAAGTATGTCATCAAGAACGTTGCCCGAAAGCATGGCTGCACAGCGACCTTCATGCCAAAGCCGCTCTT CGGGGATAACGGCAACGGCATGCACACGCATCAGAGCTTGTGGCGCGATGGAACGAACCTGTTCTACGCGGCGTGCCATT ATGCTGAACTCTCCGAGCTCGCCCTTTCCTACATCGCCGGCTTGCTGACCCATGTCGATGCGCTCCTCGCATTGACGAGC CCGACGACCAACTCGTACAAGCGGCTCGTGCCGCACTACGAGGCTCCGGTCAACGTGGCCTTCTCCAAGCGCAATCGCAG CGCTTGCATCCGGATCCCGATGTATACGACCGGACCGGAGAATGCTGCGGCCAAGCGGGTCGAGTTCCGCCCTCCCGACC CGAGTTGCAATCCGTATCTGGCCTTCGCTGCCATGCTGATGGCCGGTCTGGATGGCATTCAGCGGCGACTCGATGCGAGC CGATTTGGCCCGCTCGACGTCAATACCTATCAGTTGCCGCCCGAGCAGGCAGCACAGGTCAAGAGCGTGCCGGGCTCGCT CGGGGCCGCCCTCGAGGCGCTCGAGCGTGATCATGACTGGCTGCTGGAAGGGAACGTCTTCACCCGTGATCTCTTGGAAA CCTGGGTGAGCTATAAGCGCGAGAAGGAACTCCGAGAAGTAGAGGTTCGACCGCATCCCTATGAATTCTACCTGTACTTT GATATCTAG Protein sequence : MYGSCTSPEHVLDLIRSRGIQIVDLRFTDLPGTWQHASLPASQLSLADFERGIGFDGSSIRGFQAIEESDMLLVPDPTTA FIDPFAAVPTLVMICNVVDPETRQPYARDPRYVAQKAERYLRDLGIADTSFWGPEIEFFIFDHVSYEVLPYRMGFAIDSR EGYWNSGRNDGTPNLGYTIRPKEGYFPAPPHDTFQDIRSEAALLLEQIGVPVEMHHHEVATAGQGEIDMRRDTLTAMADK VMIYKYVIKNVARKHGCTATFMPKPLFGDNGNGMHTHQSLWRDGTNLFYAACHYAELSELALSYIAGLLTHVDALLALTS PTTNSYKRLVPHYEAPVNVAFSKRNRSACIRIPMYTTGPENAAAKRVEFRPPDPSCNPYLAFAAMLMAGLDGIQRRLDAS RFGPLDVNTYQLPPEQAAQVKSVPGSLGAALEALERDHDWLLEGNVFTRDLLETWVSYKREKELREVEVRPHPYEFYLYF DI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 3e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_002522760.1 | glutamine synthetase, type I | VFG1399 | Protein | 7e-115 | 53 |
