|
Name : amt (trd_1107) Accession : YP_002522316.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 1085857 - 1087149 bp Length : 1293 bp Strand : - Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGAGCGAGGGGGCGATCGCCTGGATGCTGGTTGCGACAGCATTGGTCCTCCTGATGACCCCGGCATTAGGGTTTTTCTA TGGGGGGCTCGTTCGCTCCAAGAACGTTCTCAACACGCTGATGATGAGTTTCGGCGCGGTATCTGTCGTAGGGCTCGCGT GGGCGTTGCTCGGCTACTCGCTCGCCTTTTCCGCCGGGTGGCCGCTGGTCGGGGGCCTTTCGCACGCGCTGTTGCGTGGG GTCGACCTAGAAGCGTCCGGCGCGATCCCACACGTGCTGTTCATGGCCTTCCAGGGGACTTTCGCCGTCATCACCGCCGC ACTCATTTCAGGGGCGCTCGTAGAACGCATGCGCTTTGGCCCTTACCTCGCATTCCTCGGTCTCTGGGCGATCGCGATCT ATGCACCGATCGCGCATTGGATTTGGGGAGGTGGCTGGCTCGCTGACCTGGGGGCCCTCGATTTTGCAGGTGGAACTGTG GTGCATATCAATGCTGGTATCGCGGCCGTCGTGGCTGCACTCGTCCTCGGCCGCCGACGCGATTACGGTCGTCAGGCTAT TCTTCCGCACAATATTCCGTTCGTCTTGCTGGGTGCGATGCTGCTGTGGCTCGGCTGGTTCGGGTTCAACGCGGGGAGTG CACTCGGGGCGAACGAGATCGCGGGACTCGCTTTCGCGAACACCATGCTGGCGCCGATGGCAACCGCGCTGGTGTGGATG ATTCTCGACCTCGTGCGGAGCGGCAAGGCGACGGCCGTAGGACTCGCGACGGCGATCGTCGTCGGTCTCGTCGCCATCAC TCCAGCTGCGGGATTCGTCTCGCCATTGTCGGCGATCGTACTCGGGGCGCTCGCTGCCTTTCCGAGTTATTTCGCGTTGC TGTGGCGAGCCCGGACGCGACTCGACGATTCGCTCGATGTCTTCGCGGCACACGGTGTCGGTGGGCTGACCGGAGCATTG TTGACCGGTGTCTTCGCGCAGGAGTCGTGGAACGGAGTCGCGAACGGGCTGCTCTTCGGGAACCCGCTGCAACTGCTGAT CCAAGCGGTCGCTGTGCTTGCGGTCGTCGCCTATAGTGCAGCTGGCACGTTCCTCATCTTGCGAGCGATCGCACTGGTGA CGTCGCTCCGCGTTGCGGATGCTGCCGAGCGTGCCGGCTTGGACGTCACCGAGCACGGCGAGCAGGCCTACACGAGTGGA GAGGGGGCGGTGTTGCTCTTGCCGCTGAGCCGGACGGGCGAGGTGACGGCGCGACCTGGGCCGGTCGTCGAAAAGGTGGG GGGCAGCGCATGA Protein sequence : MSEGAIAWMLVATALVLLMTPALGFFYGGLVRSKNVLNTLMMSFGAVSVVGLAWALLGYSLAFSAGWPLVGGLSHALLRG VDLEASGAIPHVLFMAFQGTFAVITAALISGALVERMRFGPYLAFLGLWAIAIYAPIAHWIWGGGWLADLGALDFAGGTV VHINAGIAAVVAALVLGRRRDYGRQAILPHNIPFVLLGAMLLWLGWFGFNAGSALGANEIAGLAFANTMLAPMATALVWM ILDLVRSGKATAVGLATAIVVGLVAITPAAGFVSPLSAIVLGALAAFPSYFALLWRARTRLDDSLDVFAAHGVGGLTGAL LTGVFAQESWNGVANGLLFGNPLQLLIQAVAVLAVVAYSAAGTFLILRAIALVTSLRVADAAERAGLDVTEHGEQAYTSG EGAVLLLPLSRTGEVTARPGPVVEKVGGSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 8e-55 | 48 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 8e-55 | 48 |
