Gene Information

Name : RSKD131_3596 (RSKD131_3596)
Accession : YP_002520529.1
Strain :
Genome accession: NC_011958
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 518358 - 519023 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGATGCGGATTCTGATCGTCGAGGATGATCCGGTGCTGGCGGACGGGCTGCAGGTGGGCCTCCGGCTGGCGGGCTTCGG
GCCCGAAGCGGTGGGCACGCTGGAGGATGCGCGCGCGGCCCTGGATGCGGGCCGGTTCGAGGCGATGGTGCTCGACCTGA
TGCTGCCCGACGGCTCGGGGCTCGACCTCTTGGCCGAGCTTCGGGCCGCCCGCGAGGCGGTGCCGGTGCTGGTGCTGACG
GCGCGCGACCGGCTCGACGACCGGGTGCGGGGACTGGATCTCGGCGCGGACGACTATCTTGGCAAGCCCTTCGAGCTCGA
GGAGCTGGCGGCCCGCCTGCGCGCCCTGGGCCGCCGCCCGGCGGCGCTGGCCACCCCCCGCCCGGAATGGAACGGCGTGG
CCCTCGACCTCGCGGCGATGGAGGCCTCGCGCGATGGCCGGCCCGTGGCGCTCTCGCCGCGGGAGTTCGCCGTCCTGCGG
GCCCTCATGGCCCACCCCCGCGCGATCCTGAGCAAGGCCCAGATCGAGGAGCAGCTCTACGGCTGGCAGGAGGAGATCGA
GAGCAACGCGATCGAAGTCCACGTCCACAAGCTGCGCGCCAAACTCGGACACGGCTTCATCGAGACGGTGCGCGGCGTGG
GCTATCGGCTGGCGGAGGCCTCGTGA

Protein sequence : 
MMRILIVEDDPVLADGLQVGLRLAGFGPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSGLDLLAELRAAREAVPVLVLT
ARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALATPRPEWNGVALDLAAMEASRDGRPVALSPREFAVLR
ALMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-14 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_3596 YP_002520529.1 Transcriptional regulator, winged helix family BAC0487 Protein 2e-18 43
RSKD131_3596 YP_002520529.1 Transcriptional regulator, winged helix family BAC0083 Protein 2e-12 42
RSKD131_3596 YP_002520529.1 Transcriptional regulator, winged helix family U82965.2.orf14.gene. Protein 4e-13 42
RSKD131_3596 YP_002520529.1 Transcriptional regulator, winged helix family Y16952.3.orf35.gene. Protein 6e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_3596 YP_002520529.1 Transcriptional regulator, winged helix family VFG0473 Protein 1e-22 44