Gene Information

Name : RSKD131_3580 (RSKD131_3580)
Accession : YP_002520513.1
Strain :
Genome accession: NC_011958
Putative virulence/resistance : Virulence
Product : Transport system permease protein precursor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 498043 - 499083 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence :
GTGATCCCCGCACCTTCCCTTGCTGCCGAGGTCGCGGCCCACCGACGCCGCCGCCTGCGCCGGGGCGCAGCCCTCGTGCT
CGTCCTTGCCCTCCTGATCCTCGCATCGGTGGCGCTGACCCTCTCGGTCGGCTCGACGCCCGTGGCGCCCCTCGACGTGC
TCCGCGTGCTGGCCGGGCAGGAGGTGCCGGGCGCCTCCTTCACCGTCGAGCGGCTGCGGCTGCCGCGCGCCGTGCTGTCC
CTTCTGGCCGGCCTCTGCTTCGGCTTGGGCGGCGCCGCCTGCCAGACCCTGCTCCGCAGCCCGCTGGCCAGCCCCGACAT
CATCGGCATCTCGGCAGGCAGCGGGGCCGCCGCCGTCTTCGCCATCGTCGTCCTGGGCTGGAGCGGGCCTGCCGTCTCGG
GCGCGGCCATCCTCTGCGGGCTCGCCACCGCGCTTGCGATCTATCTCCTGGCCTGGCGGGACGGGGTGGCGGGCGCGCGG
CTGATCCTCGTGGGGATCGGGATCTCGGCCATGCTGCAGAGCGTGACCGCCTATCTCCTCCTGCGCGCCCCGGACTGGAG
CCTGCAGGAGGCGCTGCGCTGGATGACGGGCAGCGTGAACGGCGCCCGGCTGTCGGACACACCGCCCCTCCTGCTGGCGC
TCGCCCTGTTCGGGACCCTGCTCCTGTGCCAGAGCCGCGAGCTCGAGGCCTTGCGTCTGGGCGACGACAAGGCCGCGGCG
CTCGGCGTGCGGATCGCCCGGACGCGGCTTCTGATCCTCGTGGGCGTGGTCGGGCTGATCGCGGTGGCGACCGCCGTCGC
GGGTCCCATCGCCTTCGTGGCCTTCCTCGCGGGTCCCATCGCCGCGCGTCTGGGCATGCCAGGGCGGCCGATCCTGCTGC
CGGCCGCGCTGATCGGCGCGCTTCTCGTTCTTCTGGCCGATTTCGCAGGGCAGGTGCTTCTGCCCGGCCGCTATCCGGTC
GGGATCGTCACCGGCGCCCTCGGCGCGCCCTACCTCATCTATCTCATCGTCCGGGTGAACCGGGCCGGAGGCACCATATG
A

Protein sequence :
MIPAPSLAAEVAAHRRRRLRRGAALVLVLALLILASVALTLSVGSTPVAPLDVLRVLAGQEVPGASFTVERLRLPRAVLS
LLAGLCFGLGGAACQTLLRSPLASPDIIGISAGSGAAAVFAIVVLGWSGPAVSGAAILCGLATALAIYLLAWRDGVAGAR
LILVGIGISAMLQSVTAYLLLRAPDWSLQEALRWMTGSVNGARLSDTPPLLLALALFGTLLLCQSRELEALRLGDDKAAA
LGVRIARTRLLILVGVVGLIAVATAVAGPIAFVAFLAGPIAARLGMPGRPILLPAALIGALLVLLADFAGQVLLPGRYPV
GIVTGALGAPYLIYLIVRVNRAGGTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09550 YP_002510938.1 ferric enterobactin transport protein Virulence PPI-1 Protein 8e-31 45
SP_1034 NP_345509.1 iron ABC transporter permease Virulence PPI-1 Protein 8e-31 45
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 4e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_3580 YP_002520513.1 Transport system permease protein precursor VFG0928 Protein 7e-15 41