Gene Information

Name : RSKD131_3539 (RSKD131_3539)
Accession : YP_002520472.1
Strain :
Genome accession: NC_011958
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 456776 - 457477 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
TTGACCGAGGGGCCGCTCATCGCGCTTCAGGGGATCGGCCGATCCTATGGCGAGGGCGAGGCCGAGGTGCGCGCGCTCGA
CAGGGTGGATCTCACCATCCGGCGCGGCGAGTTCGTGGCGATCATGGGCCCGTCGGGGTCGGGCAAGTCCACGGCCATGA
ACATCATCGGCTGCCTCGACCGGCCGACCTCGGGGCGCTACCTCTTCGAGGGCACCGACGTCTCGGGGCTCGACCGCGAC
GGGCGGGCGCTGCTGCGGCGGCACTTTCTGGGCTTCGTCTTTCAGGGCTTCAACCTCCTGGCCCGCACCACTGCGCTCGA
GAATGTCGAGCTGCCGCTGATCTACAAGGGTCTGCCGCGGGCCGAGCGGATCGAGAAGGCGCAGCGGGCGCTGGCGCGGG
TGGGGCTGACGGGGCGCGAGCATCACGATCCCTCGCAGCTCTCGGGCGGCCAGCAGCAGCGGGTGGCCATCGCCCGGGCG
CTGGCGGGCGAACCCGCGGTTATCCTCGCCGACGAGCCCACGGGCAACCTCGACAGCCAGCGCTCGCACGAGATCATGCA
GCTGATGCAGGCGCTGAACCGCGAAGGGATCACCATCGTCATGGTCACCCACGAAGAGGATATCGCGGCCTATGCCGGGC
GGCTCGTCGTCTTCACCGACGGCCATCTCACGCGGGACGAGCCGGTGAAAGCGAGGGCCTGA

Protein sequence :
MTEGPLIALQGIGRSYGEGEAEVRALDRVDLTIRRGEFVAIMGPSGSGKSTAMNIIGCLDRPTSGRYLFEGTDVSGLDRD
GRALLRRHFLGFVFQGFNLLARTTALENVELPLIYKGLPRAERIEKAQRALARVGLTGREHHDPSQLSGGQQQRVAIARA
LAGEPAVILADEPTGNLDSQRSHEIMQLMQALNREGITIVMVTHEEDIAAYAGRLVVFTDGHLTRDEPVKARA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_3539 YP_002520472.1 ABC transporter NC_012469.1.7686878. Protein 9e-54 56
RSKD131_3539 YP_002520472.1 ABC transporter NC_008702.1.4606598. Protein 3e-42 51
RSKD131_3539 YP_002520472.1 ABC transporter CP001581.1.gene798.p Protein 2e-35 47
RSKD131_3539 YP_002520472.1 ABC transporter CP001581.1.gene598.p Protein 5e-32 43