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Name : serS (CCNA_02078) Accession : YP_002517451.1 Strain : Caulobacter crescentus NA1000 Genome accession: NC_011916 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2228427 - 2229875 bp Length : 1449 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCAAGGCCATCCGCGAAAATCCTAAAGCCTATGACCGCCACTGGTCGGGCAAGGGCCGCTCGGGCGCGGC TGATGAGGCCGTGCGTCTCGACGCCGAACTGCGCGCGGCTCAGACCACGCTGCAGGAGGCCCAGGCCAAGCGGAACGAAA GCTCCAAGCTGATCGGCATGGCCAAGGCCAAGAAGGACGAGGCCGAAGCCGCGCGCCTGATGGCCGAGGTCGAGTCGCTC AAGGGCGTCATGGCCACCGCCGCCGAGGCCGAGAACCTCGCCGACGGCCAGCTGAAGGACCTGCTGGCCAGCCTGCCCAA TATTCCCGCCCCGGAGGTTCCGGCCGGGGAGGACGAGCATGGCAATCTCGAGCAGCGCCGCTGGGGCGATGCGACCAAGC TGCCGGCCGGTAAGCTGAACAAGCCCAAGGACCACGTTGACCTGGGCGCTGCCCTGGGCGGCATGGACTTCGAAGCCGCC GCCCGCATGAGCGGCGCGCGCTTCGTCGTCCTCAAGAAAGAGATCGCCCGCCTGGAGCGCGCCATCGGCCAGTTCATGCT GGACCTGCAGACGGTCGAGCACGGTTATACGGAGGTCAGCCCTCCGCTGCTGGTAAAGGATCACGCTCTTTATGGAACTG GGCAACTGCCGAAGTTCGCGGATGACCTATTCGCAACTACGAGCTTTGATCTTGGGCGTTACGACGATGAGTTTGCGCGT CAAGCGGCTGCTATAGGTTCTGCTCTGGACAAGCTCAGCGATGAGCATCGCAATCAGCTAAAGTATCTGCTTAGCAAAGA GTACATCCACGCCTCCGTCCAGAATGCTCTAGAGCGTAGTCACTGGCTGATCCCCACCGCCGAAGTCTCCCTCACCAATA TCGTCCGCGAGCAGCTGGTCGCCGAGGAAGAGCTGCCGATGCGCCTGACGGCGCTGACGCCGTCGTTCCGCGCCGAGGCC GGTTCTGCCGGTCGCGACACGCGCGGCATGATCCGCCAGCACCAGTTCTATAAGGTCGAGCTGGTCTCGATCACCACGCC CGACCAGTCGGAAGCCGAGCACCAGCGCATGGTCGAGTGCGCCGAGACGGTGCTGAAGAAGCTGGAGCTGCCGTTCCGCA CCATGCTGCTGTGCACCGGCGACATGGGCTTTGGCGCGAAGAAGACCTATGACCTGGAGGTCTGGCTGCCGTCGCAGGAC ATGTACCGCGAGATCAGCTCGTGCTCGAACTGCGGCGACTTCCAGGCGCGGCGCATGGACGCCCGCTATCGCAAGACCGG CGAAAAGGGCGGCCACTTCGTGCACACCCTGAACGGCTCGGGCCTGGCCGTCGGCCGCACGCTGGTGGCGGTGCTGGAGA ACTATCAGGACGAGGGCGGTCGCATCCACATCCCGGCGGCGCTGCAGCCCTATATGGGCGGCGTGACGCACATCGGGGGG CAGGCGTGA Protein sequence : MHDIKAIRENPKAYDRHWSGKGRSGAADEAVRLDAELRAAQTTLQEAQAKRNESSKLIGMAKAKKDEAEAARLMAEVESL KGVMATAAEAENLADGQLKDLLASLPNIPAPEVPAGEDEHGNLEQRRWGDATKLPAGKLNKPKDHVDLGAALGGMDFEAA ARMSGARFVVLKKEIARLERAIGQFMLDLQTVEHGYTEVSPPLLVKDHALYGTGQLPKFADDLFATTSFDLGRYDDEFAR QAAAIGSALDKLSDEHRNQLKYLLSKEYIHASVQNALERSHWLIPTAEVSLTNIVREQLVAEEELPMRLTALTPSFRAEA GSAGRDTRGMIRQHQFYKVELVSITTPDQSEAEHQRMVECAETVLKKLELPFRTMLLCTGDMGFGAKKTYDLEVWLPSQD MYREISSCSNCGDFQARRMDARYRKTGEKGGHFVHTLNGSGLAVGRTLVAVLENYQDEGGRIHIPAALQPYMGGVTHIGG QA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-73 | 45 |
