Gene Information

Name : phoP (CCNA_01362)
Accession : YP_002516735.1
Strain : Caulobacter crescentus NA1000
Genome accession: NC_011916
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1477912 - 1478580 bp
Length : 669 bp
Strand : +
Note : CC_1304

DNA sequence : 
TTGATGCGCGCGCTCGTCGTCGAGGATGATCCGGTCGTGGGCCCAGACCTCGCCAAGGCGCTGAGCGCGTCGGGCTTCGT
GGTCGATATCGCCCGCGATGGCGAGGACGCGTCCTTCAAGGGCGAGGTCGAGGATTACGCGCTTGTCGTGCTGGATCTGG
GCCTGCCGCGTCTTGACGGTCTGTCGGTGCTTCGGCGCTGGCGGGCCAATGACCGCGCCTTCCCGGTGCTGATCCTGTCG
GCGCGGGGCGACTGGACCGAGAAGGTCGAAGGCATCGAGGCCGGCGCCGACGACTATCTGGCCAAGCCTTTCGAGATGGG
CGAACTGCTGGCGCGCGCGCGTGGCCTCGTGCGCCGTGCGGCGGGCCGCACGTCACCCGTGATCGGCGCGGGGCGACTGG
CCCTGGATACGCGGCGCATGTCCGCCACCCTGGACGGCGCGCCGATCCGCTTGTCGCCGCTTGAGTTCCGGCTGCTGGAC
TGCCTGGCGCACAACCCCGGACGGGCTGTTTCGGCCGGTGAGCTTGCCGAACAGCTCTACGGCGTCGCCGACACCGCCGA
CACCAACGCCATCGAGGCCCTGGTGGCGCGCCTTCGCCGCAAGATCGGCGCCGACGTTATCGAAACCCGCAGAGGCTTTG
GCTACCTGCTGGCCGGCGGGACGGCGTGA

Protein sequence : 
MMRALVVEDDPVVGPDLAKALSASGFVVDIARDGEDASFKGEVEDYALVVLDLGLPRLDGLSVLRRWRANDRAFPVLILS
ARGDWTEKVEGIEAGADDYLAKPFEMGELLARARGLVRRAAGRTSPVIGAGRLALDTRRMSATLDGAPIRLSPLEFRLLD
CLAHNPGRAVSAGELAEQLYGVADTADTNAIEALVARLRRKIGADVIETRRGFGYLLAGGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002516735.1 two-component response regulator NC_002516.2.879194.p Protein 4e-37 43
phoP YP_002516735.1 two-component response regulator BAC0487 Protein 1e-29 43
phoP YP_002516735.1 two-component response regulator CP001138.1.gene1939. Protein 2e-34 42
phoP YP_002516735.1 two-component response regulator CP000647.1.gene1136. Protein 1e-33 42
phoP YP_002516735.1 two-component response regulator BAC0530 Protein 1e-33 42
phoP YP_002516735.1 two-component response regulator NC_002695.1.913289.p Protein 2e-32 41
phoP YP_002516735.1 two-component response regulator CP000034.1.gene2022. Protein 2e-33 41
phoP YP_002516735.1 two-component response regulator CP001918.1.gene2526. Protein 2e-33 41
phoP YP_002516735.1 two-component response regulator BAC0197 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002516735.1 two-component response regulator VFG0475 Protein 2e-34 42