Gene Information

Name : Tgr7_0927 (Tgr7_0927)
Accession : YP_002513002.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 994867 - 996264 bp
Length : 1398 bp
Strand : +
Note : KEGG: noc:Noc_0223 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase

DNA sequence :
ATGCCCGAAACACAGCGCAGTTCCGCCCCGCGAGGCAGTACCGAGTCCCTGAAGGTGCCCCCCCATTCCATGGAGGCCGA
ACAGGCGGTGCTGGGCGGTCTGATGCTGGACAACGAGGCCTGGGACGCGGTGGCCGACCGGCTCTGCGAGGCGGACTTCT
ACCGCCATGACCACCGCCTGATCTTCCGCGCCATCGGTGAACTGGCCGCGCGCAACAGCCCCTTCGACCTGGTGACCCTG
TCCGAGCGCCTGGAGTCCCGTGGAGAACTGGATGATGCCGGCGGGCTTGCCTACCTGGGCCTGCTGGCCAAGGACACGCC
CAGCGCCGCCAACATCCGTGCCTACGCGGACATCGTGCGCGAGCGCTCCGTGCTGCGCCAGCTGATCAGCGTGGGCACCG
AGATCGCCGATTCCGGCTTCAACCCGGAGGGCCGCGAGAGCCGCGAACTGCTGGATACCGCCGAGCAGAAGGTGTTCGAG
ATCGCCGAGCAGGGCGCCCGCTCCCAGCAGGGTTTCCGCTCCATGCGTGTGCTGCTGCGCAACACCGTGGAGCACATCGA
GATGCTCTACGAGCGGGACGACCCCATCACCGGCCTGCCCACCGGCTACAGCGAGTTCGACGAGATGACCTCCGGGCTGC
AGGGCGGCGACCTGGTGATCGTGGCCGGGCGCCCGTCCATGGGCAAGACCAGTTTCGCCATGAACATCGCCGAGTACGCG
GCCCTCAAGCAGCAGGCACCGGTGGCGGTGTTCAGCATGGAGATGCCCGGCGAGCAGCTGTCCATGCGTCTGCTCTCCTC
CATGGGCCGCATCAACCAGCAGCGCCTGCGCACCGGGCGCCTGGAAGACGACGACTGGCCGCGTTTCACCAGCGCCGTGT
CCATGCTCTCCGAGGCACAGCTCTACATCGACGACAGCCCGGCCCTGTCGCCCACGGAAGTGCGCGCCCGCGCCCGGCGC
CTGATGCGCGAGCACAAGAAGCTGGGCCTGATCGTGATTGACTACCTGCAGCTCATGCAGGTGCCTGGCAGCAACGAGAA
CCGCACCACGGAGATCTCCGAGATCTCCCGGGGTCTGAAGGCCCTGGCCAAGGAACTGAGCGTGCCGGTGATCGCGCTGT
CTCAGCTCAACCGCGGCCTGGAACAGCGTCCCAACAAGCGCCCGGTGATGTCCGACCTGCGCGAGTCCGGCGCCATCGAG
CAGGACGCGGATCTCATCTGCTTCATCTACCGGGACGAGGTCTACAACCCGGAGAGCCCCGACAAGGGCACCGCCGAGAT
CATCATCGCCAAGCAGCGTAACGGTCCCATCGGTACCGTGCGTCTCACCTTCCTGGGCCAGTACACCCGCTTCGAGAACT
ACGTGCCCGAGGTCTACTCCAGCGAGGCCTTCTCATGA

Protein sequence :
MPETQRSSAPRGSTESLKVPPHSMEAEQAVLGGLMLDNEAWDAVADRLCEADFYRHDHRLIFRAIGELAARNSPFDLVTL
SERLESRGELDDAGGLAYLGLLAKDTPSAANIRAYADIVRERSVLRQLISVGTEIADSGFNPEGRESRELLDTAEQKVFE
IAEQGARSQQGFRSMRVLLRNTVEHIEMLYERDDPITGLPTGYSEFDEMTSGLQGGDLVIVAGRPSMGKTSFAMNIAEYA
ALKQQAPVAVFSMEMPGEQLSMRLLSSMGRINQQRLRTGRLEDDDWPRFTSAVSMLSEAQLYIDDSPALSPTEVRARARR
LMREHKKLGLIVIDYLQLMQVPGSNENRTTEISEISRGLKALAKELSVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIE
QDADLICFIYRDEVYNPESPDKGTAEIIIAKQRNGPIGTVRLTFLGQYTRFENYVPEVYSSEAFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-101 55
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-84 51
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-89 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-86 49
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-87 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-87 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-81 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-81 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 7e-71 45