|
Name : Tgr7_0787 (Tgr7_0787) Accession : YP_002512866.1 Strain : Thioalkalivibrio sulfidophilus HL-EbGR7 Genome accession: NC_011901 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 846723 - 848372 bp Length : 1650 bp Strand : - Note : KEGG: aeh:Mlg_2079 type IV-A pilus assembly ATPase PilB DNA sequence : ATGGCTGAGGCCGACGCCGGAAAGGCGGTTGAGGCTGCACAAAAGAAGCGCGTCCCCCTGGTTGCCTATCTGGTAGACAA CAAGCTGGTGGAATCCAGGCGGGTCGCTCAGGCCGCCGCCGAGGAGTTCGGCACCCCGGTCTTCGACCTGGATAGCTTCG ACAAGGAACTCCTGCCCAAGAAGCTGGTGGACGAGAAGCTGGTCCGCCAGCACCATGCCCTCCCCCTGTTCAAGCGCGGC AACCGGCTGTTCGTCGGGATCGCCGACCCCATGAACCTCACCGCCCTGGACGAGATCAAGTTCAACACCGGTATCGCCAC CGAACCGGTGCTGGTGGAACAGGACAAACTGGGCAAGCTGATCGAGGAAAGCCTCAACGACACCGGCGCAGTCATGGAAG GCCTCATGGACGACGATCTCGACAACCTCGAGATCAGCGCCGATGACGACGACAGGAAAGGCGAGGTGACGGAAAGCGAG GTGGACGACACCCCGGTAGTCCGCTTCGTCAACAAGGTGTTACTGGATGCCATCAACCGCAAGGCCTCGGACATTCACTT CGAGCCCTACGAGAAAGAATTCCGGGTTCGTCTGCGCATGGACGGCGTGCTCCACGAAGTGGCCAAACCCCCAGTATCCC TGTCGCCACGCATCATCGCCCGCATCAAGGTCATGTCCCGCATGGACATCTCCGAGCGCCGCATCCCCCAGGACGGGCGC ATCAAGATGCAGCTCTCCAAGAGTCGGGCCATCGACTTTCGTGTCAACACCTGCCCCACGCTCTACGGCGAAAAGGTGGT ATTGCGCATCCTCGACCCCACCAGCGCCTCCTTAGGCATCGACGTGCTGGGTTATGAGGAAGAACAGAAAAAGCTTTACC TGGATGCCCTGAGCAAACCCTACGGCATGATCCTGGTCACCGGCCCGACCGGCTCCGGCAAGACCGTCTCCCTTTACACG GGCCTTGGCATCCTGAACACCCCGGATCGCAACATCTCCACCGCCGAGGACCCGGCCGAGATCAACATGCCCGGGATCAA CCAGGTGAACGTCAACCCCAAGGTGGGCCTGACCTTCGCCTCTGCCCTGCGCGCCTTCCTGCGCCAGGACCCGGACGTGA TCATGGTGGGCGAGATCCGTGACCTGGAAACCGCCGAGATCGCCATCAAGGCGGCACAGACCGGCCACCTGGTGCTCTCC ACCCTGCATACCAACGACGCCCCCCAGACCCTGACCCGTCTGGCTAATATGGGGGTGCCGCCCTACAACATCGCCTCCTC AATCCTCCTTATCATCGCCCAGCGACTTGCCCGGCGGCTGTGCAACCACTGCAAGACCGTCGATGATGTGCCCAAGGATG TGCTGCTACAGGAAGGGTTCACAGAGGATGACTTTAAGGACGGCATCAAGATCTACAAGGCCGTGGGCTGCGACCAGTGT ACCAATGGCTACAAGGGGCGCGTGGGCATCTACCAGGTGCTGCCCATCTCCGAGGCCACCCAGCGCCTCATCCTGGAGGG TGGCAACTCCATGCAGCTCGCCGAGCAGGCCCGCAAGGAAGGCATCAACGACCTCCGCCGCGCCGGTCTGCTCAAGGTCA AGGCCGGGATGACCAGCCTTGAAGAGATCAACCGCGTGACCAAGGACTGA Protein sequence : MAEADAGKAVEAAQKKRVPLVAYLVDNKLVESRRVAQAAAEEFGTPVFDLDSFDKELLPKKLVDEKLVRQHHALPLFKRG NRLFVGIADPMNLTALDEIKFNTGIATEPVLVEQDKLGKLIEESLNDTGAVMEGLMDDDLDNLEISADDDDRKGEVTESE VDDTPVVRFVNKVLLDAINRKASDIHFEPYEKEFRVRLRMDGVLHEVAKPPVSLSPRIIARIKVMSRMDISERRIPQDGR IKMQLSKSRAIDFRVNTCPTLYGEKVVLRILDPTSASLGIDVLGYEEEQKKLYLDALSKPYGMILVTGPTGSGKTVSLYT GLGILNTPDRNISTAEDPAEINMPGINQVNVNPKVGLTFASALRAFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHLVLS TLHTNDAPQTLTRLANMGVPPYNIASSILLIIAQRLARRLCNHCKTVDDVPKDVLLQEGFTEDDFKDGIKIYKAVGCDQC TNGYKGRVGIYQVLPISEATQRLILEGGNSMQLAEQARKEGINDLRRAGLLKVKAGMTSLEEINRVTKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-76 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 2e-165 | 64 |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 7e-152 | 59 |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 1e-120 | 52 |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 2e-75 | 46 |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-77 | 46 |
| Tgr7_0787 | YP_002512866.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 3e-77 | 43 |
