Gene Information

Name : Tgr7_0473 (Tgr7_0473)
Accession : YP_002512557.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Unknown
Product : transposase IS204/IS1001/IS1096/IS1165 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 503493 - 504782 bp
Length : 1290 bp
Strand : +
Note : PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase TnpA

DNA sequence :
ATGACCGAACTTCCCGACAACATCCTTCACCTGCCGCAATACCAAGTACTGGGCTGCAAATCAACCGACGACGAAATGCA
CTTCCAGGTGGACGTGCCCGATCCCATCGCCTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTACGGTTCGGCAAGCGTG
ACGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACTCTCTGGGTGGTCCGCCGCCGATACACCTGCCGGGCC
TGCAAGACAACATTCAGGCCCCAGCTACCGGAGATGGGGGACGGATTCCGTATGACACTGCGGCTGCATGAGTACGTGGA
GAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCCTGGACGAGAAGACGGTGCGCGACATCTTCA
ACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGCATCCTGGGCATTGACGAGCTATACCTGAAC
AAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGACCTTCTGGCCACCCGCCGCCAGGACGTGGT
GACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCGGGCAG
CGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCATGTGGTGCGCATGGCCAACGATGCCCTAGAG
AGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGACTCTCAAGGGAGACCGGAAAATCCTGCTGAA
ACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGACAGGCGCGTTCCCGCAACTGCTGGCCGCCT
ACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTCCAGGCAGAAGCCGCCCTGGACGAGTGGATA
GCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGCAGTGGGAAACTGGCGCGAAGAGACCATGAC
CTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCGTGAAG
GGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCACCGACTGCGAAG
GTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGCAGAGGAACTCAACTACGGAGTCGATCTATC
AACCATCTGA

Protein sequence :
MTELPDNILHLPQYQVLGCKSTDDEMHFQVDVPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMGDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
RVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWI
ATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 0.0 99
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 0.0 99
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 0.0 99
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 0.0 99
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 0.0 99
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 3e-80 43