Gene Information

Name : Tgr7_0471 (Tgr7_0471)
Accession : YP_002512555.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Resistance
Product : CDF family heavy metal/H(+) antiporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 502059 - 502955 bp
Length : 897 bp
Strand : +
Note : KEGG: maq:Maqu_4003 CDF family heavy metal/H(+) antiporter

DNA sequence :
ATGAGCAAATCCTGTGGTGGCGCCTGTGGCGGTGATGCAACGTCCGCAGCGGATACCGATATACAGGCCTCCTCCGAGGC
GCCAGGGAGATGGGTCAGTGTTTATGCCGTGCCGAAGATGGACTGTCCATCAGAAGAACGAATGATTCGCCTAGCCCTGA
ACGGCTTTGAGGAGATTCGGGCGCTGTCCTTCGACTTGTCGAACCGCCGGCTGAAGGTCGTGCATGACGGCGAGGTCGAG
CCCGTCACCTCGAAACTGAAGACCTTGGGGCTAGGCGCCTCGCTTCAGGAAACCGTCGCTGTAAATCCGGAGACCATCAA
GGCCGCCGAGTTTTCGGCAGCTTCTGCTAAGCAAGAATCCGGGACCCTGCGCTGGTTGCTCGGCATCAATGCACTTCTGT
TCGTGGTGGAAATGACTGCCGGTCTGATGGCTCAGTCAACTGGCCTCATTGCAGAGTCCCTGGACAATTTTGCTGATGCG
GCAGTGTACGGACTCGCTCTTTATGCGGTTGGGCATAGCGTGAAAAGGCAGGTCCGTGTTGCGCACGTTGCTGGTGTGGT
CCAACTGGTTTTGGCTGTTGGCGTACTCGTAGAGGTCGTGAGGCGCTTTGTATTCGGTAGTGAGCCTGAATCGCTGGTGA
TGATAGCCATCGCATTCGTCGCATTGATTGCCAATACCGCCTGTCTGCTGATGGTATCCAAACATCGAGGGGGCGGAGCT
CATATGAAGGCTAGCTGGATATTTTCGGCCAACGACGTGGTGATCAACCTGGGGGTCATCACCGCCGGCGCCCTGGTCGC
GTGGACCGGGTCCAATTATCCGGATCTGATTATCGGCACCATCGCGGGGGTCATTGTACTTAACGGTGCCAGACGCATTC
TGGCGTTGAAGGGTTAA

Protein sequence :
MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVE
PVTSKLKTLGLGASLQETVAVNPETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLMAQSTGLIAESLDNFADA
AVYGLALYAVGHSVKRQVRVAHVAGVVQLVLAVGVLVEVVRRFVFGSEPESLVMIAIAFVALIANTACLLMVSKHRGGGA
HMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGTIAGVIVLNGARRILALKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 2e-107 91
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-107 91
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-107 91
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-107 91
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-107 91
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 2e-107 91
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 2e-107 91