Gene Information

Name : Tgr7_3259 (Tgr7_3259)
Accession : YP_002515314.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3409322 - 3410731 bp
Length : 1410 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mca:MCA1677 glutamine synthetase, type I

DNA sequence : 
ATGTCCCCAGCAGATGTGATGAAGATGATCAAGGAAAACGGCGTCAAGTTCGTCGACTTCCGTTTCACCGATACTCGCGG
CAAGGAGCAGCACGTTTCCGTGCCTTCCCACACCATTGAAGAGGACGTCTTCGAGAGCGGCAAGATGTTCGACGGCTCCT
CCATCGCCGGCTGGAAGGGCATCAACGAGTCCGACATGATCCTCATGCCCGACGCCGCCAGCGCCGTCATGGACCCCTTC
TTCGACGAGCCCACCCTGATCATCCGCTGCGGCGTCATCGAACCCGCCACCATGCAGGGCTATGACCGCTGCCCCCGTTC
CCTGGCCCAGCGCGCAGAGGCCTACCTGGCCAGCACCGGCATCGCCGACGGCGCCCTGTTCGGCCCCGAGAACGAGTTCT
TCGTGTTCGACGACGTGAAGTGGGGCAACGAGATCTCCGGCTCCTTCTTCCGCGTGGACTCCGACGAGGCCTCCTGGAAC
TCCGAGAAGGTGTTCGAGGGCGGCAACATCGGTCACCGTCCCACCGTCAAGGGTGGCTACTTCCCCGTGCCCCCGGTGGA
CAGCCTGCAGGATCTGCGTTCCGCCATGTGCCTGGCCTTGGAAGAGATGGGTCTGACCACCGAGGTGCACCACCACGAGG
TGGCCACCGCCGGCCAGTGCGAGATCGGCGTCGGCGCCGCCAGCCTGACCCGCAAGGCCGACGAGGTGCAGATCCTCAAG
TACGTGGTGCAGAACGTGGCCCACAACTATGGCAAGACCGCCACCTTCATGCCCAAGCCCCTGGTGGGCGACAACGGCAG
CGGCATGCACGTGCACATGTCCCTGTCCAAGGGCGGCGTGAACCTGTTCAGCGGTGACCAGTACGGCGGCCTGTCCGAGA
CCGCCCTGTACTACATCGGCGGCATCATCAAGCACGCCCGCGCGCTGAACGCCTTCACCAACGCCTCCACCAACAGCTAC
AAGCGTCTGGTGCCCGGTTTCGAGGCCCCGGTGATGCTGGCCTACTCCGCCCGCAACCGTTCCGCCTCCATCCGCATCCC
GTTCGTGATGAGCCCCAAGGCCCGCCGAATCGAGGTGCGCTTCCCGGATTCCACCGCCAACCCCTACCTGGCCTTCTCGG
CCATGATGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCCGGCGAGGCCATGGACAAGAACCTGTACGATCTG
CCCCCCGAAGAGGAGAAGCAGATCCCGCAGGTGTGCCACGCCCTGGATCAGGCCCTCAACGCCCTGGACAAGGACCGCGA
CTTCCTCAAGGCCGGCGGCGTGTTCAGCGACGACATGATCGATGCCTACATCGCCCTGAAGATGGAAGAAGTGACCCGCC
TGCGCATGACCACCCACCCGGTGGAGTACGATCTGTACTACAGCCTCTAA

Protein sequence : 
MSPADVMKMIKENGVKFVDFRFTDTRGKEQHVSVPSHTIEEDVFESGKMFDGSSIAGWKGINESDMILMPDAASAVMDPF
FDEPTLIIRCGVIEPATMQGYDRCPRSLAQRAEAYLASTGIADGALFGPENEFFVFDDVKWGNEISGSFFRVDSDEASWN
SEKVFEGGNIGHRPTVKGGYFPVPPVDSLQDLRSAMCLALEEMGLTTEVHHHEVATAGQCEIGVGAASLTRKADEVQILK
YVVQNVAHNYGKTATFMPKPLVGDNGSGMHVHMSLSKGGVNLFSGDQYGGLSETALYYIGGIIKHARALNAFTNASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPFVMSPKARRIEVRFPDSTANPYLAFSAMMMAGLDGIQNKIHPGEAMDKNLYDL
PPEEEKQIPQVCHALDQALNALDKDRDFLKAGGVFSDDMIDAYIALKMEEVTRLRMTTHPVEYDLYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-109 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_3259 YP_002515314.1 glutamine synthetase, type I VFG1399 Protein 6e-108 50