|
Name : gltD (Tgr7_3019) Accession : YP_002515076.1 Strain : Thioalkalivibrio sulfidophilus HL-EbGR7 Genome accession: NC_011901 Putative virulence/resistance : Unknown Product : glutamate synthase subunit beta Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0493 EC number : - Position : 3158561 - 3159967 bp Length : 1407 bp Strand : + Note : glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate DNA sequence : ATGGCCAACCCGATGCAGTTCCTCGAAATCCCCCGCCAGGACCCGAAGAAGACCCCGGCGCAGGTGCGCATCCACGAGTT CAAGGAGATCTACGGGCAGTTTGACCCGGAGACCGCCAAGCACCAGTCCGGCCGCTGCCTGGCCTGCGGCAACCCCTACT GCGAGTGGAAGTGCCCGGTCCACAACTACATCCCCAACTGGCTCAAGCTGGTGGCCGAAGGCAACCTGTTCGAGGCCGCG GAGATGTCCCACAAGACCAACTCCCTGCCGGAGATCTGCGGCCGCGTCTGCCCCCAGGACCGCCTGTGCGAGGGCGCCTG CACCCTCAATGACGGCTTCGGCGCCGTCACCATCGGCTCCATCGAAAAATACATCACCGACGAGGCCCTGAAGGCCGGCT GGCGCCCGGACCTGTCCGGCGTGGTGGCCACCGGCAAGCGCGTGGCCATCGTGGGCGCGGGCCCGGCGGGCCTGGGTTGC GCCGACGTGCTCACCCGCAACGGCGTGGAGGCGGTGGTGTTCGACCGCTACCCGGAGATCGGCGGCCTGCTCACCTTCGG CATCCCTCCCTTCAAACTGGAAAAGGACGTGGTCAAGACCCGCCGCCAGCTGATGGAGGAGATGGGCGTGAAGTTCCGGC TCAACACCGAGATCGGCCGCGACGTCCCCTTCCAGCAGCTGCTGGACGAGTACGATGCCGTGTTCCTGGGCATGGGCACC TACACCTACATGAAGGGCGGTTTCCCCGGCGAGGACCTGCCCGGCGTGCACGAGGCCCTGCCCTTCCTGATCTCCAACAT CAACCGGGAGATGGGCTTCGAGCGCTCCGCCGACGAGTTCATCGACATGAAGGACCAGCGGGTGGTGGTGCTGGGCGGTG GCGACACCGCCATGGACTGCAACCGCACCTCCGTGCGCCAGGGCGCCGCGAAGGTCACCTGCGCCTACCGCCGCGACGAG GAGAACATGCCCGGTTCCCGCCGCGAGGTGGTCAATGCCAAGGAAGAGGGCGTGCAGTTCCTGTGGAACCGCCAGCCGGT GGAGATCGTCGGCAACGGCCGCGTGGAAGGCGTCAAGGTGGTCACCACCCAGCTGGGCGCGCCTGACGAGCGTGGCCGCC GCCGTCCCGAGCCTGTGCCCGGCTCCGAGGAAGTGATCCCCGCCGACCGGGTGATCATCGCCTTCGGCTTCCGCCCAAGC CCTTCCCCCTGGTTCGCCGAGTTCGGCATCACTTTGGACGAGGGCGGCCGGGTCACGGCGCCCGCCGACGGCAAGCATGC CTTCCAGACCGCCAATCCCAAGGTGTTCGCCGGCGGCGACATGGTGCGCGGCTCCGACCTGGTGGTCACCGCCGTGTTCG AGGGTCGCCAGGCCGCGGAAGGCATCCTGGATTACCTTGGAGTGTAA Protein sequence : MANPMQFLEIPRQDPKKTPAQVRIHEFKEIYGQFDPETAKHQSGRCLACGNPYCEWKCPVHNYIPNWLKLVAEGNLFEAA EMSHKTNSLPEICGRVCPQDRLCEGACTLNDGFGAVTIGSIEKYITDEALKAGWRPDLSGVVATGKRVAIVGAGPAGLGC ADVLTRNGVEAVVFDRYPEIGGLLTFGIPPFKLEKDVVKTRRQLMEEMGVKFRLNTEIGRDVPFQQLLDEYDAVFLGMGT YTYMKGGFPGEDLPGVHEALPFLISNINREMGFERSADEFIDMKDQRVVVLGGGDTAMDCNRTSVRQGAAKVTCAYRRDE ENMPGSRREVVNAKEEGVQFLWNRQPVEIVGNGRVEGVKVVTTQLGAPDERGRRRPEPVPGSEEVIPADRVIIAFGFRPS PSPWFAEFGITLDEGGRVTAPADGKHAFQTANPKVFAGGDMVRGSDLVVTAVFEGRQAAEGILDYLGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YP0342 | CAF28571.1 | putative oxidoreductase | Not tested | YAPI | Protein | 2e-135 | 60 |
