Gene Information

Name : Tgr7_2845 (Tgr7_2845)
Accession : YP_002514905.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 2984093 - 2986258 bp
Length : 2166 bp
Strand : +
Note : KEGG: ajs:Ajs_2208 hypothetical protein

DNA sequence :
ATGGCCCAGCCGCATTCGGTGGAAGTCCTGCTGCGTCCGGCGGTCGAGCTTTACACCGTCGCGGTCTGCCTCGGCGCCGC
CGTTCTCTGCCTCGCCGCGCCCTGGTCGCTGGCACTGAGCCCGCTGGTGGGCCTGGCCGGTGCGCTGGCCTTTCTGACCT
TCGGCACCATCCGCTTCTACGAAGCCTGGGCGATCCTGCGCTATCGCCGCAACATCCGCCGCATGCCGCGCTACGTGATG
GCCAGTCGCGACGTGCCGGTGAGCCAGCATCGCCTGTTCGTGGGCCGGGGTTTTCGCTGGGATCAGCGCCACACCCACAG
GCTGATGCAGACATACCGGCCGGAGTTTCGCCGCTACGTCGAGCTGACACCGCTCTACCGATCCGTGCGCCGGCTGGAGG
AGCGTTTGGAGTTCGCGCCTCGCCCGCTGCCTCTGCTGGCCCGCGTGACTGCGTGGGACAACCCGTTGAACCCGGCGCGG
CCGCTGCCGCCGGTCGGCGGCCTGCCACGGTTACACGGCATTGAACCGCACGAGGTCGATGTGTCGCTGCCGCTGGGCGA
GCGTGTCGGCCACACGCTGGTGCTCGGCACCACCCGTGTCGGCAAGACGAGACTCGCGGAGTTGTTCATCACCCAGGACA
TCCGCCGCAGGGTCAATGGCGAACACGAGGTCGTGATCGTCTTTGACCCCAAGGGCGACGCGGACCTGTTGAAAAGAATG
TACGTGGAGGCCCAGCGCGCAGGACGCGCAGGGGAGTTCTATTGCTTTCATCTCGGCTGGCCGGACATCTCCGCGCGCTA
CAACGCGGTGGGCCGCTTCGGACGAATTTCGGAGGTCGCCACGCGCATCGCCGGCCAGCTCTCCGGCGAAGGCAACAGCG
CAGCGTTTCGCGAGTTCGCCTGGCGTTTCGTGAACATCATCGCGCGTGCCCTGGTGGAATTGGGACGACGCCCGGACTAC
CTGCTGATCCAGCGCCACGTCGTCAACATCGATGCGTTGTTCATCGAATACGCGCAGCACTTTTTCGCCAAGGCCGAACC
GAAGGCCTGGGAGGTCATCGTCCAGCTCGAAGGCAGGCTGAACGACAAGAACATTCCCCGTCACATGATCGGGCGGGAAA
AGCGCGTGGTGGCGATCGAGCAGTATCTGTCGCAGGTGCGCATCTACGACCCGGTGCTCGACGGCCTGCGTTCGGCGGTG
CGCTACGACCGCACCTACTTCGACAAGATCGTCGCCTCGCTGCTGCCGCTGCTGGAAAAGCTCACCACGGGCAAGATCGC
GCAACTCCTGGCGCCGAACTATGCCGATCTCGATGATCCGCGACCGATCTTCGATTGGTTGCAGATCATCCGCAAACGCG
CGGTGGTGTACGTGGGCCTGGATGCACTCTCGGACGCTGAGGTCGCGGCGGCCGTGGGCAACTCGATGTTCTCCGACCTG
GTATCGGTCGCCGGGCACATCTACAAGTTCGGCATCGACGACGGCCTGCCCGGCGCCTCGACCGGCGCCAAGGTGCCGAT
CAATGTGCATGCCGACGAGTTCAACGAATTGATGGGCGATGAATTCATCCCCATGGTGAACAAGGGCGGCGGCGCCGGTA
TGCAGGTCACGGCGTACACGCAAACACTCAGCGACATCGAGGCGCGCATCGGCAACCGCGCCAAGGCCGGTCAGGTCATC
GGCAACTTCAACAACCTGTTCATGTTGCGCGTGCGGGAGACGATCACCGCCGAGTTGCTGACCCAGCAGTTGCCCAAGGT
CGAGGTGTACACCACCTCAATCGTCAGCGGCGCCACGGATACCTCCGATCCCCAGGGGCACACCGCGTTCACGTCCAACA
CGCAGGATCGCATCACCACCACCAGCGTCCCACTGATCGAACCGGCGCACGTGGTCAATCTGCCGAAGGGGCAGGCCTTC
GCGCTGCTCGAAGGCGGCAACCTGTGGAAGATCCGCATGCCGCTGCCCGCGCCCGACGCCGACGAGGCCATGCCCAAGGA
CTTGCAGGAGCTGGCCGACTACATGCGCCAGCACTACGTCGATGCCGGCGACTGGTGGGAAAGCCAGGGCCTGCCGGCGT
TGCAGCACGAGGCGCTGCCGGCAGACCTGCTCGACGACTTCAAGCAAATGGCCTTCGCCGATACTGCCGAGGATGGAAGG
GCATGA

Protein sequence :
MAQPHSVEVLLRPAVELYTVAVCLGAAVLCLAAPWSLALSPLVGLAGALAFLTFGTIRFYEAWAILRYRRNIRRMPRYVM
ASRDVPVSQHRLFVGRGFRWDQRHTHRLMQTYRPEFRRYVELTPLYRSVRRLEERLEFAPRPLPLLARVTAWDNPLNPAR
PLPPVGGLPRLHGIEPHEVDVSLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRVNGEHEVVIVFDPKGDADLLKRM
YVEAQRAGRAGEFYCFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGRRPDY
LLIQRHVVNIDALFIEYAQHFFAKAEPKAWEVIVQLEGRLNDKNIPRHMIGREKRVVAIEQYLSQVRIYDPVLDGLRSAV
RYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYADLDDPRPIFDWLQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKFGIDDGLPGASTGAKVPINVHADEFNELMGDEFIPMVNKGGGAGMQVTAYTQTLSDIEARIGNRAKAGQVI
GNFNNLFMLRVRETITAELLTQQLPKVEVYTTSIVSGATDTSDPQGHTAFTSNTQDRITTTSVPLIEPAHVVNLPKGQAF
ALLEGGNLWKIRMPLPAPDADEAMPKDLQELADYMRQHYVDAGDWWESQGLPALQHEALPADLLDDFKQMAFADTAEDGR
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 85
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 84
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 74
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 70
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 70
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 69
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 62
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 62
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 62
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 0.0 62
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 0.0 58
traD AAW83057.1 TraD Not tested GGI Protein 1e-128 49