Gene Information

Name : Tgr7_2812 (Tgr7_2812)
Accession : YP_002514872.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2956723 - 2956941 bp
Length : 219 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: mpt:Mpe_A2332 phage transcriptional regulator, AlpA

DNA sequence :
ATGTCTTCGCAGACCACCGCCCCGGCGACGCCGGTTGAACGTCGCATCCTGCGCCGCGCCGAAGTCGAAGCCAAAACCGG
CTTCAAGCGCGCGCACATTTACAGCCTGATGAAAGAAGGCAGGTTCCCCAAGGCGCTGCGTTTGGGTGTGCGCGCAGTGG
GCTGGGACTCGACCGAGATCGACCAGTGGATCGCTGATCGCCTCAAAGAACGCGCCTGA

Protein sequence :
MSSQTTAPATPVERRILRRAEVEAKTGFKRAHIYSLMKEGRFPKALRLGVRAVGWDSTEIDQWIADRLKERA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 1e-23 73
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 3e-20 69
unnamed CAA21398.1 - Not tested HPI Protein 8e-11 48
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 5e-11 48
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 5e-09 45
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 6e-08 45
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-08 43
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-08 43
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-08 43
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-08 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_2812 YP_002514872.1 phage transcriptional regulator AlpA VFG1118 Protein 6e-09 43
Tgr7_2812 YP_002514872.1 phage transcriptional regulator AlpA VFG1141 Protein 1e-08 41