Gene Information

Name : Tgr7_2520 (Tgr7_2520)
Accession : YP_002514584.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2665271 - 2666560 bp
Length : 1290 bp
Strand : -
Note : KEGG: hha:Hhal_0309 arsenical pump membrane protein

DNA sequence :
ATGCTGCTGACCGCGCTGGCCATCTTTGTCGTCACCCTCGTGCTGGTCATCTGGCAGCCCCGGGGGCTTGGCATCGGCTG
GAGCGCCGTGGCTGGCGCCCTGGTGGCGCTGGCCACCGGCGTGGTGGGTCTCGCCGACGTGCCGGTGGTGGTGGACATCG
TCTGGAACGCCACCCTCACCCTGGTGTTCATCATCATCATCTCCCTGCTGCTGGACGAGGCGGGCTTCTTCGAGTGGGCG
GCGCTACACGTGACCTGTTGGGGGGCGGGCAGCGGTCTGCGCCTGTACGTGTTCATCGTGCTGCTGGGGGCGGCGGTCTC
GGCCATGTTCTCCAACGACGGCGCGGCGCTCATGCTCACCCCCATCGTGCTGGAGATCCTGCGTGCCCTGGGCTTCGGCG
CCGGGGCCATGCTGGCCTTCGTCATCGCGGCGGGCTTCATCGCCGACACCGCGAGCCTGCCCCTGGTGATCTCCAACCTG
GTGAACATCGTCTCGGCGGACTTCTTCGGCATCGGTTTTCTGGAATACGCCCGGGTCATGGTGGTCGTGAATATCGTCTC
GGTGCTGGCCTCACTGGCCGTGCTGGTGCTGCTGTTCCGCCGCCGCATCCCCGCCCGCTATGACCCCTCGCAGCTGCGCG
CACCCCACGAGGTGATCCGGGACGCCGCCGTGTTCCGCGCCGGCTGGTGGGTGCTGGGCCTGCTCCTGGCCGGCTTCGTG
GTGCTGGAACCCATGGGGGTGCCGGTGTCCTTCGTGGTGGGTCTGGGCGCGGCCCTGCTGCTGGGCGTGGCGGCCCGGGG
GCGGGTCATCGCCATTCGCCGGGTGCTGGGCAACGCACCCTGGCAGATCCTGATCTTCTCGGTGGGCATGTACCTGGTGG
TCTACGGCCTGCGCAATGCGGGGCTGACCGCGGAGCTGGCGGGGCTGCTGGACTGGTTCGCCGGACAGGGGGTCACGCTG
GCGGCCCTGGGCACCGGTTTCCTGGCGGCGTTCCTGTCCTCGGTGATGAACAACCTGCCGGCGGTGATGGTGGTGGCGCT
CGCCATCGACGAGTCCGGGGCCGCGGGGCTTGTGAAGGAGGCGATGATCTATGCCAACGTGATCGGCTCGAATCTCGGCC
CCAAGATCACCCCCATCGGAAGCCTCGCCACGCTGCTCTGGCTGCACGTGCTGGCCCGCAAGGGGATCACCATCACCTGG
GGTCAGTACATGCGCATCGGGCTGCTGATCACGCCGCCGGTGCTGCTGGTGACGCTGCTGGCCCTGGCGGGGTGGATCTC
TTTGAAGTGA

Protein sequence :
MLLTALAIFVVTLVLVIWQPRGLGIGWSAVAGALVALATGVVGLADVPVVVDIVWNATLTLVFIIIISLLLDEAGFFEWA
ALHVTCWGAGSGLRLYVFIVLLGAAVSAMFSNDGAALMLTPIVLEILRALGFGAGAMLAFVIAAGFIADTASLPLVISNL
VNIVSADFFGIGFLEYARVMVVVNIVSVLASLAVLVLLFRRRIPARYDPSQLRAPHEVIRDAAVFRAGWWVLGLLLAGFV
VLEPMGVPVSFVVGLGAALLLGVAARGRVIAIRRVLGNAPWQILIFSVGMYLVVYGLRNAGLTAELAGLLDWFAGQGVTL
AALGTGFLAAFLSSVMNNLPAVMVVALAIDESGAAGLVKEAMIYANVIGSNLGPKITPIGSLATLLWLHVLARKGITITW
GQYMRIGLLITPPVLLVTLLALAGWISLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-77 65
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-69 54
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-70 54
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-71 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0578 Protein 2e-78 67
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0576 Protein 3e-78 66
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0577 Protein 2e-77 65
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0031 Protein 7e-79 65
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0574 Protein 1e-70 55
Tgr7_2520 YP_002514584.1 arsenical pump membrane protein BAC0575 Protein 7e-72 54