|
Name : Tgr7_0227 (Tgr7_0227) Accession : YP_002512313.1 Strain : Thioalkalivibrio sulfidophilus HL-EbGR7 Genome accession: NC_011901 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 246412 - 247626 bp Length : 1215 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: aeh:Mlg_2392 general secretion pathway protein F DNA sequence : ATGCCTGCCTTTGAATACACCGCCCTGAACCCCAAAGGCCGCGAGGTCCGGGGTGTCCTGGAAGGCGATACGCCGCGCCA GGTGCGCCAGCAGCTGCGCGAGGGCGGGCTCACGCCGCTGGAGGTGGAGGAGGTCAAGAGCCGGGAGGGGCGCCGCGTGC GCATGCCGGGCCTGGGGCGGGGCATCGGCGCCATGGACCTGGCCCTGCTCACCCGCCAGCTGGCCACCCTGGTGCGTTCC GGCCTGCCCATCGAGGAGGCCCTGGGCACGGTGGCGCGCCAGAGCGAGAAGCCGCGCATCCGCAGTATGCTCATGGCGGT GCGAACCCGGGTGATGGAGGGTCACACCCTGGCCCGGGGCCTGTCCGACTTCCCCCACGTGTTCCCCGACATCTACCGCA CCACCGTGGAGGCGGGCGAACAGTCCGGCCATTTGGAAGTGGTGCTGGAGCGCCTGGCCGACTACACGGAAAACCGCCAG CAGATGCGCCAGAAGATCCAGCTGGCCCTGTTCTACCCCGCCATCCTCACCGCCATGGCCCTGTTGGTGACCATCGCCCT GCTGGCCTACGTGGTGCCGGAGGTCGTGCAGGTGTTCGAGGGTATCGGCCAGGAACTGCCCTGGCTGACCCGCACCCTGA TCGCCGTGAGCGACGGCCTGCGCGACTACGGCCTGTGGATGCTGCTCGGCCTGGTGCTGGCCGGCATGGCCGTCGGCTGG CTGCTCAAGAAGCCCGGACCGCGCACCGCCTGGCACCGGGTGATCCTGCGCATGCCGCTGGCCGGTCGCATGGCCCGGGG CATGAACACGGCCCGCTTCGCCCGCACCCTGTCCATCCTCTCCGCCAGCGGCGTGTCCGTGCTGGAGGCCCTTCGCATCT CCGCCCAGGTGGTGGCCAGCCTGCCCATGCGCGACGCCATCCAGACCGTGGCCCAGCGGGTGCGCGAGGGCTCGGGCATC GGCAATGCCCTGGAGCGCACCGGCTACTTCCCGCCCATCACCGTGCATCTCATCAAGAGCGGCGAGGCCAGCGGCAGCCT GGACGCCATGCTGGAGCGCGCGGCGGTGAACCAGGAACGGGAACTGGAGGCGCGCATCGGCATGATCATGGGCATCCTGG AGCCGGTGTTGATCCTGGTCATGGGCCTGGTGGTGCTGGTGATCGTGCTGGCCATCCTGCTGCCCATCTTCGAACTCAAC CAGCTGGTGAACTGA Protein sequence : MPAFEYTALNPKGREVRGVLEGDTPRQVRQQLREGGLTPLEVEEVKSREGRRVRMPGLGRGIGAMDLALLTRQLATLVRS GLPIEEALGTVARQSEKPRIRSMLMAVRTRVMEGHTLARGLSDFPHVFPDIYRTTVEAGEQSGHLEVVLERLADYTENRQ QMRQKIQLALFYPAILTAMALLVTIALLAYVVPEVVQVFEGIGQELPWLTRTLIAVSDGLRDYGLWMLLGLVLAGMAVGW LLKKPGPRTAWHRVILRMPLAGRMARGMNTARFARTLSILSASGVSVLEALRISAQVVASLPMRDAIQTVAQRVREGSGI GNALERTGYFPPITVHLIKSGEASGSLDAMLERAAVNQERELEARIGMIMGILEPVLILVMGLVVLVIVLAILLPIFELN QLVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-68 | 45 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-69 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tgr7_0227 | YP_002512313.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-90 | 54 |
| Tgr7_0227 | YP_002512313.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-67 | 45 |
| Tgr7_0227 | YP_002512313.1 | general secretion pathway protein F | VFG1870 | Protein | 4e-74 | 43 |
