|
Name : Tgr7_0226 (Tgr7_0226) Accession : YP_002512312.1 Strain : Thioalkalivibrio sulfidophilus HL-EbGR7 Genome accession: NC_011901 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 244747 - 246303 bp Length : 1557 bp Strand : + Note : KEGG: aeh:Mlg_2399 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGCAGTCCATCCCCGACCCTGGAGAATGCCGGCCTGACCGGTGAGCTGCGCGAGGAACTGGCGGCCCAGGCTGCGGG CCCGGAGCAGGGCCTGAGCTTCGGTTTCGCCCGCCGCCACGGCGTGGTCCTGCTGCAGGAGAAGATTTCATCCGGGCAGC CGGTGAACGTCGCCTGCCGACAGGGCGTCAGCAGTCAGACCCTGGCGGAGCTGCGCCGCCACCTGGGTTGTCCCCTGCGT ATCGAGGCGGTCAGCGATGCGCGCTTCGACGCCCTGCTTCGGGAGCGTTACGAGCGCAGCTCCAGCGACGCCATGCAGCT CATGGGCGACATGGGCGAGGACGACCTGGACAGCGTGGCGCGCAGCCTGTCGGAGCCCGAGGACCTGCTGGAAACCGAGG ACGATGCGCCCATCATCCGGCTCATCAACGCCCTGCTCACCGAGGCGGTGAAAGAGAACGCCTCGGACATCCACATCGAA CCCTTCGAGAACCGCCTCACGGTGCGTTTCCGCGTGGACGGCGTGCTGCGCCAGGTGCTGGAACCGCCCCGGGTGCTGGC GCCGCTGATCACCTCCCGCATCAAGGTCATGGCGCGCCTGGACATCGCCGAGAAGCGTCTGCCCCAGGACGGACGCATCT CGCTCAAGGTGGCCGGTCGTGCCGTGGACGTGCGCGTCTCCACCCTGCCCTCCGGTCACGGCGAGCGGGTGGTGCTGCGT CTGCTGGACAAGCAGGCCGGGCGCCTGGACCTGGTGCAGCTGGGCATGGACGACAGAACCCTCAAGGTGATGCAGCGCGC CATCCACCGGCCCCACGGCATCATCCTGGTTACCGGCCCCACCGGCTCCGGCAAGACCACCACCCTGTACGCGGCGCTCA CCCAGCTCAACGACCGCAGCCGCAACATCCTCACCGTCGAAGACCCCATCGAGTACGATCTCGACGGCATCGGCCAGACC CAGATCAACCCCAAGGTGGAGATGACCTTCGCCCGTGGCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGGTGATGGT GGGCGAGATCCGCGACCTGGAAACGGTGCAGATCGCCGTGCAGGCCTCGCTCACCGGTCACCTGGTGCTCTCCACCCTGC ACACCAACACCGCCGTGGGCGCCATCACCCGCCTGCGGGACATGGGCGTGGAACCCTTCCTGCTGTCCTCGACCGTTGTG GCCATCCTGGCCCAGCGACTGGTGCGCGTGCTGTGCGATCAGTGCAAGGAGCCCTATGCGGCCGGCGAGACCGAGTGCGA GCTGATCGGTCTGGCCAAGGAGCCGCCGCCCACGCTCTATCGCGCCGTGGGCTGTGACCACTGCAACGGGCTTGGCTACC GGGGCCGAACCGGCATCTACGAACTGGTGGAAGTGGACGATGCCCTGCGCAACCTGATCCACGATGGCGCCGGCGAGCAG CAGCTGGAACGCCACGCCCGCGCCCACGGCCCCAGCATCCGCGCCGACGGCCGGCGCCGCGTCCTCGCCGGCCAGACCAC GGTGGAGGAAGTGCTGCGTGTGACGAAAGAAGACTAG Protein sequence : MSSPSPTLENAGLTGELREELAAQAAGPEQGLSFGFARRHGVVLLQEKISSGQPVNVACRQGVSSQTLAELRRHLGCPLR IEAVSDARFDALLRERYERSSSDAMQLMGDMGEDDLDSVARSLSEPEDLLETEDDAPIIRLINALLTEAVKENASDIHIE PFENRLTVRFRVDGVLRQVLEPPRVLAPLITSRIKVMARLDIAEKRLPQDGRISLKVAGRAVDVRVSTLPSGHGERVVLR LLDKQAGRLDLVQLGMDDRTLKVMQRAIHRPHGIILVTGPTGSGKTTTLYAALTQLNDRSRNILTVEDPIEYDLDGIGQT QINPKVEMTFARGLRAILRQDPDVVMVGEIRDLETVQIAVQASLTGHLVLSTLHTNTAVGAITRLRDMGVEPFLLSSTVV AILAQRLVRVLCDQCKEPYAAGETECELIGLAKEPPPTLYRAVGCDHCNGLGYRGRTGIYELVEVDDALRNLIHDGAGEQ QLERHARAHGPSIRADGRRRVLAGQTTVEEVLRVTKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-139 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-139 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-160 | 68 |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG1876 | Protein | 8e-140 | 59 |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-139 | 58 |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-78 | 49 |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG1880 | Protein | 1e-87 | 43 |
| Tgr7_0226 | YP_002512312.1 | general secretory pathway protein E | VFG0112 | Protein | 4e-89 | 42 |
