Gene Information

Name : Tgr7_1973 (Tgr7_1973)
Accession : YP_002514041.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2093704 - 2095179 bp
Length : 1476 bp
Strand : -
Note : KEGG: maq:Maqu_2001 sigma-54 dependent trancsriptional regulator

DNA sequence :
ATGAACGCGCTGGACCAGGCCTCGCACGCGGAGGAGTCAACGGTTGCGGCCCTGCCCAACCGGGTGCTGCTGCTGGCCTC
CGATCCGGACCGCGCCTCGCGTCTGGAAACTGTGCTGGATTTCCTGGAATGTCAGCCCACCTTCCACAGGACCCTTCCCG
AGATGGCTGTCGACTGCGATCAGGGCTGGTTGGCCTGGGTGGTCAGCGGTTGTCTCGGCGAAGCCCTGGAGGATCTGCTT
AACGAATTGCCTGAGCGTTCACCGGGTATCCCCGTGGTGCTGGTGGGCGATGATTCGGAATTTCCTTCATTAACCAAGGC
TGCCCAGGCCCTGGTGGTGCGCCGGGTGGAGTACCCGGTGCGCTATCCCCAGCTCTCCCACGCCCTGCAGTGCGCACGCC
ACGCGGTGGCCAACGGCGGACTGGACGGGGCCCGTTCCCTGGAACTGTTCCGCTCCCTGGTGGGGCGCAACCCCATGGTG
CAGCGCATCCGCCGGCTCATCGGCCAGGTGGCGGCCACGGACGCCAACGTGCTGGTGCTGGGCGAGACCGGCACCGGCAA
GGAAGTGGTGGCGCGCAACATCCACAGCGCCTCCAGCCGCCGGGAGCGGCCCTTCGTGGCGGTCAACTGCGGCGCCATCC
CCGCCGATCTGCTGGAAAGCGAGCTGTTCGGCCACGAGAAGGGCGCCTTCACCGGCGCGCTCACCAGCCGCCAGGGCCGC
TTCGAGCTGGCCCAGGGCGGCACCCTGTTCCTGGACGAGATCGGCGACATGCCCCTGCCCATGCAGGTGAAGCTGCTGCG
GGTGCTGCAGGAACGCACCTTCGAGCGGGTGGGCAGCAACCGCAGCATCCAGTGCGACGTGCGCATCATCGCCGCCACCC
ACCGGGACCTGGAACTGGCCATCGACGAAGGCAGCTTCCGGGAAGACCTCTATTACCGCCTCAACGTGTTCCCCATCGAG
GTGCCGCCCCTGCGCCACCGCCGCAGCGACCTGCCCCTGCTGATCAGTGAGCTGACCGCGCGCATGGAAGGTGAGGGCCG
CGGCAGCGTGCGCCTGGGGGAATCGGCCATGCGCGCCCTGTCCGTGTACGACTGGCCCGGCAATGTGCGCGAGCTGGCGA
ACCTGATCGAGCGCCTGGCCATCATGCATCCTGGCGAGACCGTGGAGGTCTCGGACCTGCCGGCCAAGTTCCGCCGCGAA
GGCGACGAGGAACTGGCGGAGCTGGCCCAGGCGGAGATGGACGGCGAGGGCCTGCCGCCCGGCTATCTGCCCGGGGCCCC
CGGCCTGCCCAGCGAGGGCATCGATCTGAAGGAATACCTCAACGATCTGGAGATGGGCCTGATCCGCCGGGCCCTGGACG
AATCCAACGGGGTGGTGGCCCACGCCGCCAAGCTGCTCGGCATGCGCCGGACCACCCTGGTGGAGAAGATGCGCAAGTTC
GGCATTTCCCGCCCCGAGGACGCGACGGAAATTTGA

Protein sequence :
MNALDQASHAEESTVAALPNRVLLLASDPDRASRLETVLDFLECQPTFHRTLPEMAVDCDQGWLAWVVSGCLGEALEDLL
NELPERSPGIPVVLVGDDSEFPSLTKAAQALVVRRVEYPVRYPQLSHALQCARHAVANGGLDGARSLELFRSLVGRNPMV
QRIRRLIGQVAATDANVLVLGETGTGKEVVARNIHSASSRRERPFVAVNCGAIPADLLESELFGHEKGAFTGALTSRQGR
FELAQGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNRSIQCDVRIIAATHRDLELAIDEGSFREDLYYRLNVFPIE
VPPLRHRRSDLPLLISELTARMEGEGRGSVRLGESAMRALSVYDWPGNVRELANLIERLAIMHPGETVEVSDLPAKFRRE
GDEELAELAQAEMDGEGLPPGYLPGAPGLPSEGIDLKEYLNDLEMGLIRRALDESNGVVAHAAKLLGMRRTTLVEKMRKF
GISRPEDATEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 9e-54 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 9e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_1973 YP_002514041.1 response regulator receiver protein VFG1248 Protein 2e-100 52