Gene Information

Name : Tgr7_0166 (Tgr7_0166)
Accession : YP_002512252.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 180439 - 181119 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xom:XOO_0385 two-component system regulatory protein

DNA sequence : 
ATGCGTGTAGTCGTGATCGAGGACGAGGCGCCCCTGCGCGAGCAGCTGCGCACCCGCCTGGAGGCGGAGGGCTGGATGGT
GGACACCAGCGCCGATGGCGAAGACGGGCTGTTCCAGCTGACCGAATATCCCGCCGATGTGGCGGTGGTGGACCTGGGCC
TGCCGCGCCTGCCGGGGCTGGAGGTGATCCGCCGCCTGCGCGCCGGAGGCGGCAAGGTGCCGGTGCTGATCCTCACCGCA
CGCAGCCAGTGGCAGGAGAAGGTGCAGGGCCTGGAGGCCGGCGCGGACGACTACCTGGCCAAGCCCTTCCACATGGAGGA
ACTGGTGGCCCGCATCCGGGCCCTGGCGCGGCGCGCCGCCGGCAGCGCCGACGGGCGCCTGGCCCTGGGGCCGCTGGTGC
TGGATACCGCCGCCCAGGCGGTGAGCCGCAACGGCGAGCCCGTCTCGCTGACCACCTTCGAGTACCGGGTGCTGGAATAC
CTGGCCCGCCACGCCGGCCAGGTGGTCTCCAAGCAGACCCTGACCGACTATCTCTACGCCCACGACGACGACCGGGACAG
CAACGTGCTGGAGGTGCTCATCGGCCGGTTGCGCAAGAAGCTGGACCCGGACGGCAGCCTGACTCCCATCGAGACCCTGC
GCGGCCGGGGCTACCGGCTCACCCTGACCCCGGACATCTGA

Protein sequence : 
MRVVVIEDEAPLREQLRTRLEAEGWMVDTSADGEDGLFQLTEYPADVAVVDLGLPRLPGLEVIRRLRAGGGKVPVLILTA
RSQWQEKVQGLEAGADDYLAKPFHMEELVARIRALARRAAGSADGRLALGPLVLDTAAQAVSRNGEPVSLTTFEYRVLEY
LARHAGQVVSKQTLTDYLYAHDDDRDSNVLEVLIGRLRKKLDPDGSLTPIETLRGRGYRLTLTPDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 5e-53 53
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator BAC0530 Protein 2e-39 47
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 2e-39 46
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator CP000034.1.gene2022. Protein 5e-40 46
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 4e-39 46
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 3e-40 46
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator NC_002695.1.913289.p Protein 3e-39 45
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator CP004022.1.gene1005. Protein 4e-38 44
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-19 42
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator VFG0475 Protein 3e-40 46
Tgr7_0166 YP_002512252.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-27 41