Gene Information

Name : Tgr7_1479 (Tgr7_1479)
Accession : YP_002513550.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1584682 - 1585404 bp
Length : 723 bp
Strand : -
Note : KEGG: hha:Hhal_1918 ABC transporter related

DNA sequence :
ATGAAGGCGGCGTCGGACAAGGAGGTGGTATTCCGCGCCCGGGGCCTGACCAAGGTCTACCGCATGGGCGAGGTCGAGGT
CCATGCCCTGCGAGGCGTGGACCTGGACCTCTACAAAGGCGAATTCGTCGTCCTCCTCGGCCCTTCGGGGAGTGGCAAGT
CGACCCTGCTCAACATCCTCGGAGGCCTGGACAGCCCGAGCGGCGGCGAGGTCATCTGCCAGGGACGGAACCTGGTCAAG
GCCGGCGACCGGGAACTGACCGAATTCCGGCGCCACTTCGTGGGTTTCGTGTTTCAGTTCTACAACCTCATCCCCAGTCT
CACGGCCCGTGAAAATGTGGCCATCGTCACCGAGATCGCCCGAAACCCCATGTCACCGGAAGAGGCCCTGGAGATGGTGG
GCCTCGGTGAACGCATGGACCACTTTCCCGCGCAACTCTCCGGCGGCGAACAGCAGCGGGTGGCCATCGCCCGGGCGGTC
GCCAAGCGCCCGGCGGTGCTGCTCTGCGACGAGCCCACCGGCGCCCTGGACTCCAAGACCGGCATCGTGGTGCTCGAGGT
CCTGGAGCGCATCAACCGGGAACTGGGCACCACCACCGCGGTGATCACCCACAATGCCGGCATCGCCGACATGGCCGACC
GGGTGATCCATTTCATGGACGGCCACATCGAGCGCATCGACAGGCCCGCACAGCGCAAGGCACCCCGGGAACTGAGCTGG
TGA

Protein sequence :
MKAASDKEVVFRARGLTKVYRMGEVEVHALRGVDLDLYKGEFVVLLGPSGSGKSTLLNILGGLDSPSGGEVICQGRNLVK
AGDRELTEFRRHFVGFVFQFYNLIPSLTARENVAIVTEIARNPMSPEEALEMVGLGERMDHFPAQLSGGEQQRVAIARAV
AKRPAVLLCDEPTGALDSKTGIVVLEVLERINRELGTTTAVITHNAGIADMADRVIHFMDGHIERIDRPAQRKAPRELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_1479 YP_002513550.1 ABC transporter NC_012469.1.7685735. Protein 1e-51 52
Tgr7_1479 YP_002513550.1 ABC transporter NC_008702.1.4606598. Protein 2e-32 48
Tgr7_1479 YP_002513550.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 44
Tgr7_1479 YP_002513550.1 ABC transporter NC_012469.1.7686878. Protein 5e-38 43
Tgr7_1479 YP_002513550.1 ABC transporter CP001581.1.gene598.p Protein 2e-40 42