Gene Information

Name : Tgr7_1305 (Tgr7_1305)
Accession : YP_002513378.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1401625 - 1402287 bp
Length : 663 bp
Strand : -
Note : KEGG: cti:RALTA_B1092 polysialic acid transport ATP-binding protein

DNA sequence : 
ATGATCGAGGTTCACAACGTCTACAAGCGCTACCACAACCATCACGGCAGCGACTGGGTGTTGAAAGGCATCAACTTCAC
CCTGCCCAAGGGGGTAAGTGTCGGCCTGTTGGGACGCAACGGCGCCGGAAAGTCCACGCTGCTGAGACTGATCGGAGGCA
TGGATTATCCGGACCGGGGAGAGATTGTTCGCAAGTGTCGGGTTTCCTGGCCCATCGGTCTTTCCGGCGCGTTCCAGGGC
TCCATGACGGGACGGCAGAATGTGAAATTCGTGGCGCGGGTTCATGGCAATGAATCCAGCATCGATGAAGTGATGCGCTT
CGTGGAGGACTTCGCTGAGATCGGCGCGGCCTTCGATGAGCCGGTGAAGACCTATTCCAGCGGCATGCGCAGCCGGCTGG
CGTTCGGTCTGTCACTGGCTTTTGATTTCGACGTCTACCTCTCGGACGAGGCTACGGCCGTGGGTGACAGGGCCTTCAAG
GAAAAGGCCAAAAAGGCGTTTAAGGATCGCGTGAGCAGGGCCAGTCTGATCATGGTGTCTCACAGCGAGGGAATCCTGAA
GGACCTCTGCCAGGCTGGCCTCTGGCTCGACAAGGGCGAAGCAGTCTGGTTTGACGATATCAACGATGCGTTGAACGCCT
ACCACGAGAGTATTGAAAAGTGA

Protein sequence : 
MIEVHNVYKRYHNHHGSDWVLKGINFTLPKGVSVGLLGRNGAGKSTLLRLIGGMDYPDRGEIVRKCRVSWPIGLSGAFQG
SMTGRQNVKFVARVHGNESSIDEVMRFVEDFAEIGAAFDEPVKTYSSGMRSRLAFGLSLAFDFDVYLSDEATAVGDRAFK
EKAKKAFKDRVSRASLIMVSHSEGILKDLCQAGLWLDKGEAVWFDDINDALNAYHESIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-49 52
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-50 51
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-41 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_1305 YP_002513378.1 polysialic acid transport ATP-binding protein VFG1449 Protein 2e-50 51
Tgr7_1305 YP_002513378.1 polysialic acid transport ATP-binding protein VFG0258 Protein 1e-41 48
Tgr7_1305 YP_002513378.1 polysialic acid transport ATP-binding protein VFG0696 Protein 1e-42 48
Tgr7_1305 YP_002513378.1 polysialic acid transport ATP-binding protein VFG2563 Protein 4e-35 41