Gene Information

Name : dexB (SPN23F_03150)
Accession : YP_002510373.1
Strain : Streptococcus pneumoniae ATCC 700669
Genome accession: NC_011900
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.70
Position : 300883 - 302490 bp
Length : 1608 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGAAAAATGGTGGCATAATGCCGTAGTCTATCAAGTCTATCCAAAGAGTTTTATGGATAGTAATGGAGATGGAGT
TGGTGATTTGCCAGGTATTACCAGTAAGTTGGACTATCTAGCTAAGTTAGGAATCACAGCGATTTGGCTTTCTCCCGTTT
ATGACAGCCCTATGGATGATAATGGCTACGATATTGCTGATTATCAAGCGATTGCGGCTATTTTTGGAACCATGGAGGAC
ATGGATCAGCTGATTGCAGAAGCTAAGAAGCGTGACATTCGTATCATCATGGACTTGGTGGTTAATCATACCTCAGATGA
ACATGCTTGGTTTGTCGAAGCCTGTGAAAATACTGACAGCCCTGAGCGAGACTACTATATCTGGCGCGATGAACCCAATG
ACCTAGATTCTATCTTTAGTGGGTCTGCTTGGGAATACGATGAAAAGTCAGGTCAATACTATCTCCACTTTTTCAGCAAA
AAACAGCCGGATCTCAACTGGGAAAATGAAAAACTTCGCCAGAAAATTTATGAGATGATGAACTTCTGGATTGATAAAGG
TATTGGTGGTTTCCGTATGGATGTTATTGACATGATTGGCAAAATTCCTGACGAGAAGGTAGTCAATAATGGTCCTATGC
TCCATCCCTATCTCAAGGAAATGAATCAGGCGACCTTTGGAGATAAGGATCTCTTGACAGTAGGGGAGACTTGGGGAGCA
ACGCCAGAGATTGCCAAGCTCTACTCTGATCCAAAGGGGCAAGAATTGTCTATGGTCTTCCAGTTTGAACATATCGGTCT
TCAGTATCAGGAAGGTCAGCCTAAATGGCACTATCAAAAAGAGCTGAATATCGCTAAGTTAAAAGAAATCTTCAACAAAT
GGCAGACAGAGTTAGGAGTTGAGGACGGTTGGAATTCCCTCTTCTGGAACAATCATGACCTCCCTCGTATCGTCTCAATC
TGGGGAAATGACCAAGAATACCGCGAAAAATCTGCCAAAGCCTTTGCAATCTTGCTTCATCTTATGAGAGGAACTCCTTA
TATCTACCAAGGTGAGGAGATTGGGATGACCAACTATCCGTTTGAAACACTGGATCAAGTAGAAGATATTGAATCTCTCA
ACTATGCGCATGAGGCTCTTGAAAAAGGTGTTCCGATTGAAGAAATCATGGACAGTATCCGTGTTATTGGACGTGACAAT
GCTCGTACCCCTATGCAATGGGACGAGAGCAAAAACGCTGGTTTCTCAACAGGTCAACCTTGGTTGGCGGTTAATCCAAA
TTACGAGATGATCAATGTCCAAGAAGCGCTGGCAAATCCAGATTCTATTTTCTATACCTATCAGAAACTGGTCCAAATTC
GCAAGGAGAATAGCTGGCTAATTCGAGCTGACTTTGAATTGCTTGATACGGCTGATAAGGTCTTTGCTTATATACGTAAG
GATGGCGACCGTCGCTTCCTAGTTGTGGCTAACTTGTCCAATGAAGAGCAAGACTTGACAGTAGAAGGAAAAGTCAAATC
TGTCTTGATTGAAAACACCCTAGCTCAAGAAGTCTTTGAAAAACAAATCTTAGTTCCATGGGATGCTTTCTGTGTGGAAT
TACTATAA

Protein sequence :
MQEKWWHNAVVYQVYPKSFMDSNGDGVGDLPGITSKLDYLAKLGITAIWLSPVYDSPMDDNGYDIADYQAIAAIFGTMED
MDQLIAEAKKRDIRIIMDLVVNHTSDEHAWFVEACENTDSPERDYYIWRDEPNDLDSIFSGSAWEYDEKSGQYYLHFFSK
KQPDLNWENEKLRQKIYEMMNFWIDKGIGGFRMDVIDMIGKIPDEKVVNNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKLYSDPKGQELSMVFQFEHIGLQYQEGQPKWHYQKELNIAKLKEIFNKWQTELGVEDGWNSLFWNNHDLPRIVSI
WGNDQEYREKSAKAFAILLHLMRGTPYIYQGEEIGMTNYPFETLDQVEDIESLNYAHEALEKGVPIEEIMDSIRVIGRDN
ARTPMQWDESKNAGFSTGQPWLAVNPNYEMINVQEALANPDSIFYTYQKLVQIRKENSWLIRADFELLDTADKVFAYIRK
DGDRRFLVVANLSNEEQDLTVEGKVKSVLIENTLAQEVFEKQILVPWDAFCVELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 3e-118 49