Gene Information

Name : SPN23F_12430 (SPN23F_12430)
Accession : YP_002511177.1
Strain : Streptococcus pneumoniae ATCC 700669
Genome accession: NC_011900
Putative virulence/resistance : Unknown
Product : relaxase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3843
EC number : -
Position : 1209814 - 1211643 bp
Length : 1830 bp
Strand : -
Note : -

DNA sequence :
ATGGTCATCACTAAACACTTTGCGATTCATGGAAAAAATTATCGTAGCAAACTAGTCAAATATATTTTGAATCCAAGTAA
AACAAAAAATCTAGCACTAGTTTCAGATTTTGGTATGAGAAATTATTTAGATTTTCCTAGTTATAAAGAACTAGTGAAGA
TGTACAATGATAATTTTTTAAGTAATGATGGTCTTTATGAATTTCGTCATGATAGGCAAGAAGTAAATCAACGAAGAATT
TATTCTCATCATATTATTCAGTCTTTTTCTCCAGATGATCATCTTACTCCTGAACAAATCAATCGGATTGGTTATGAGAC
AGTTAAAGAGTTGACAGGAGGTAGATTTCGTTTTATCGTAGCAACACATGTCGATAAAGGTCATATCCACAATCACATCA
TCCTAAATTCAATTGATCAGAATTCTGATAAAAAGTTTCTATGGAATTATAAGTCAGAACGTAATCTACGAATGGTTTCA
GATCGTCTCTCAAAAATTGCAGGTGCAAAGATTATAGAAAATCGTTATTCGCATCGTCAGTATGAAGTTTATCGAAAAAC
CAATTACAAATATGAAATAAAACAACGGGTATATTTTCTAATTGAGAACTCGAAAAATTTTGAAGATTTCAGGAAAAAAG
CAAAAGCTTTACATTTAATAATTGATTTTAGACACAAGCATGTTACTTTTTTTATGACTGATTCAAATATGAAACAAGTC
GTACGTGATGATAAATTGAATAGAAAACAACCTTATAATGAAACTTATTTTAAGCAAAAGTTTGTTCAAAGGGAAATTAT
AAACATCTTAGAATTTCTACTTCCGAAAATGAAGAATATGAATGAATTGATTCAACAAGCAGAATTTTTTGACTTAAAAA
TAATTCCGAAAGAAAAACATGTTCTATTTGAATTTAATGGGATTAAGCTTTCAGAACAGGAATTGGGAAAAATGAATCAG
TACAGTGTTAGTTATTTTCAAGACTATTTTAATAACAAAAATGAAACTTTTGTCTTAGATAATAATAATTTAATTGAACT
TTACAATAAAGAAAAGCTAATTAAAGAAAAAGAGTTGCCGACAGAAGAGGTGGTATGGAAATCCTATCAAGATTTCAAGA
GAAATAGGGATGCTGTTCATGAGTTAGAAGTAGAGTTGAATCTTAATCAAATAGAAGCAGTAGTAGACGATGGAATTTAC
ATTAAGGTACAGTTTGGTATCCGACAAGAAGGACTTATTTTTGTACCAAATATTCAAATCAATATGGAAGAAGAAAAAGT
TAAAGTATTTCTCAGAGAAACTAGTTCTTACTATGTATATCATAAAGATTCAGCAGACAAAAATCGCTTTATGAAAGGTA
AAACTTTAATTAGGCAATTTACGCTTCAGCATGAACCGCAGCATATGTATAGAAGAATACCTCTTAGCAAAATTAAAGAA
AAAATAGAACAATTAGATTTTCTTATATCTGCGGAAAATAGTCCGAATGATTTTGAAGATATAACAAATGATTTCATTGC
CCAAATATCATATCTAGAGAATATGATTGAACAAGTCCAAAATAAAATTGATGATTTAACTAATTTAGAGGAAGTATTGT
TGAATAATACGACAAATAGTTCTAGCAATTTAGAAAATAGTATTCAAGGTAAAAGTTCAGTAGATACGATAGAGAAGGAT
TTATACATATATAAAGGAAAGATTGAAACACTGAAGGAACAACATGGAGAAGCAATAAATTTATTTGAAATGTTTAATAA
AACAATAAAGAAATATAAGAAAAAACAAAATATGAAATCTATTGAGGAAAATGAGATACATTTAGAGTAA

Protein sequence :
MVITKHFAIHGKNYRSKLVKYILNPSKTKNLALVSDFGMRNYLDFPSYKELVKMYNDNFLSNDGLYEFRHDRQEVNQRRI
YSHHIIQSFSPDDHLTPEQINRIGYETVKELTGGRFRFIVATHVDKGHIHNHIILNSIDQNSDKKFLWNYKSERNLRMVS
DRLSKIAGAKIIENRYSHRQYEVYRKTNYKYEIKQRVYFLIENSKNFEDFRKKAKALHLIIDFRHKHVTFFMTDSNMKQV
VRDDKLNRKQPYNETYFKQKFVQREIINILEFLLPKMKNMNELIQQAEFFDLKIIPKEKHVLFEFNGIKLSEQELGKMNQ
YSVSYFQDYFNNKNETFVLDNNNLIELYNKEKLIKEKELPTEEVVWKSYQDFKRNRDAVHELEVELNLNQIEAVVDDGIY
IKVQFGIRQEGLIFVPNIQINMEEEKVKVFLRETSSYYVYHKDSADKNRFMKGKTLIRQFTLQHEPQHMYRRIPLSKIKE
KIEQLDFLISAENSPNDFEDITNDFIAQISYLENMIEQVQNKIDDLTNLEEVLLNNTTNSSSNLENSIQGKSSVDTIEKD
LYIYKGKIETLKEQHGEAINLFEMFNKTIKKYKKKQNMKSIEENEIHLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1056 NP_345530.1 Tn5252, relaxase Not tested PPI-1 Protein 5e-175 65
SSU98_0919 YP_001200477.1 chromosome segregation ATPase Not tested 89K Protein 5e-138 54
SSU05_0913 YP_001198279.1 chromosome segregation ATPase Not tested 89K Protein 5e-139 54
Spaf_1098 YP_006309900.1 relaxase Not tested FWisland_1 Protein 9e-134 52