|
Name : Hore_09460 (Hore_09460) Accession : YP_002508697.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 1019366 - 1021057 bp Length : 1692 bp Strand : + Note : PFAM: Alpha amylase, catalytic domain DNA sequence : ATGACTAAAAAAGAGAAAAGCTGGTGGAAAGAGGCGGTAGTTTATCAAGTATACCCGCGTTCTTTTAATGATACTACTGG TAATGGTATCGGGGACTTAAGGGGTATTATTGAAAAGCTCGATTATATAAAAGACCTTGGTGTTGATGTTATCTGGTTAA ATCCCGTTTACGAGTCTCCATGTGATGACATGGGGTATGATATTAGCAATTATAGAAAAATATTACCCCAGTTTGGCACC ATGGAGGATTTTGATCTTCTCCTCTCTGAAATGCATAAGCGGGGATTAAAACTTGTCATGGATCTGGTAGTGAATCATAC TTCTGATGAACATCGCTGGTTTGTTGAGTCCAGGAAGTCCAAAGATAATCCCTACCGGGATTATTATATCTGGAAAAAGC CAAAAGCTGATGGTAGCCCTCCCAACAACTGGGTTTCCTATTTCGGGGGTTCTGCCTGGGAGTATGATGAACAAACCGGT GAATATTATCTCCATCTGTTTTCCAAAAAACAGCCTGATTTGAACTGGGAAAACCCAAAGGTCAGAGAAGAAGTAAAGGA TATAATGCGTTTCTGGCTTGATAAAGGTGTCGATGGATTTAGAATGGATGTTATTGGATTTATTTCAAAGGATCCTGATT TTGAAGATTTTCCAACTGATAATCCCAGTGGGAAGGATCTTGGTGATAAATATGCCAATGGGCCCAGATTACATGAATTT TTACAGGAACTCCATGATGATGTTCTTAGTCACTATGACTGTATGACCGTTGGAGAATGCCCCGGAGTATCACCTGAAGA TGCCCTGTTAATAGTTGGTAAAGACAGGCGAGAACTCCAGACTCTCTTTCAATTTGAGGGAATGGACATTGATTATGGTA AAAATGGAAGCCGCTTCAGTATAGGTAACTGGGATGTTCATGGTTTTAAAAAAGTATATACAAAATGGCATAAAAAGTTA TATGGTAAGGCCTGGAACAGTATTTATCTTATGAACCATGACCAACCACGGGCAGTGTCCAGGTTTGGTGATGATAAAAA ATACCGCAAAGAATCTGCTAAAATGTTAGCAACCTTCCTGCTGTCTATGTGGGGTACCCCCTATATCTATCAGGGGGAAG AAATAGGTATGACAAATTGCCCCTTTGAAGGTGTGGAAGAATTCCGGGATATTGAAATGATTAATTATTATAATGAACAG ATAAGTAAGGGTAAAACTAAGGAAGAAATAATGCCCGGATTATTATACAGAGGACGGGATAATTCCAGGACTCCAATTCA ATGGAATGACTCCAGAAATGCAGTTTTTTCTGATGCTGAAGAGACCTGGATAAAGGTAAACCCCAATTATACTGAAATTA ATGTTGAAGAAGCTGAAAAAGACCCTGATTCAATTCTCCATTATTTCCGTCGTATGATTAAAACCAGGAAAGATAATGAT GTTCTAATATATGGTGACTATGAACTGGTAGATGAAGGAAATGACGATGTGTATGCCTATCGAAGATTTCTAGACAATGA AGAAATGCTTGTTCTTCTAAACTTTACAGATAAAGAGACAAGCTGTGATGTTAGCCCTTATAACTTAGAAGATAAAGAGC TGATTATCTCTAATTATAAGGGGGGTCAAAAGGTCAAAGGAACTGAAGTGACTTTAAGGCCTTATGAAGCCAGGATCTAT AAGATAAAATAA Protein sequence : MTKKEKSWWKEAVVYQVYPRSFNDTTGNGIGDLRGIIEKLDYIKDLGVDVIWLNPVYESPCDDMGYDISNYRKILPQFGT MEDFDLLLSEMHKRGLKLVMDLVVNHTSDEHRWFVESRKSKDNPYRDYYIWKKPKADGSPPNNWVSYFGGSAWEYDEQTG EYYLHLFSKKQPDLNWENPKVREEVKDIMRFWLDKGVDGFRMDVIGFISKDPDFEDFPTDNPSGKDLGDKYANGPRLHEF LQELHDDVLSHYDCMTVGECPGVSPEDALLIVGKDRRELQTLFQFEGMDIDYGKNGSRFSIGNWDVHGFKKVYTKWHKKL YGKAWNSIYLMNHDQPRAVSRFGDDKKYRKESAKMLATFLLSMWGTPYIYQGEEIGMTNCPFEGVEEFRDIEMINYYNEQ ISKGKTKEEIMPGLLYRGRDNSRTPIQWNDSRNAVFSDAEETWIKVNPNYTEINVEEAEKDPDSILHYFRRMIKTRKDND VLIYGDYELVDEGNDDVYAYRRFLDNEEMLVLLNFTDKETSCDVSPYNLEDKELIISNYKGGQKVKGTEVTLRPYEARIY KIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-137 | 53 |
