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Name : Hore_04860 (Hore_04860) Accession : YP_002508239.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 525669 - 528281 bp Length : 2613 bp Strand : + Note : PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I DNA sequence : GTGAAGAAAAAGCTTTATTTGCTGGATGGACAAAGCCTGGCCCACAGGGCTTTTTATGCATTGCCCCTGCTTTCAACTTC CCGGGGGGAGTATACTAATGCTGTGTTTGGATTTACCAGGATGTTATTAAAACTACTTGACGAGGAAAAACCTGATTTAA TTGCGGTTGCCTTTGATAAAAAGGCCCCTACCTTCCGACATAAGGAATATAAAGAATACAAGGCTCATCGCAAAAAGATG CCGGAAGAATTAAAACCACAGCTGTCTTTAATTAAAGAAGTACTTAAATCTTTTAGTATTCCCATTATTGAAATTGAGGG TTTTGAGGCCGATGATATTATAGGGACAATGGCACGAAAGGGGGAAGAGGAGGGATTTGAGGTCGTTATTGTAACCGGTG ACCGGGATGCCCTCCAGCTGGTTACAGAAGATGTTTCTGTAATGTATACCAAAAGAGGCATATCAGATATTGTAAGGTAT GATTTAAATAAGGTAAGGGAAAGGTACGAACTGGAACCTCAACAGCTTATCGATATGAAGGGTTTGATGGGAGATAGTTC TGACAATATTCCCGGTGTTCCTGGTATCGGTGAAAAGACGGCCATAAAGTTATTAAAGGAGTTTTCTTCACTGGAAGAGA TCCTTGACAATATTGATAAGGTCTCCGGTAAAAAGCGGAAGGAAAACCTCCAAAAATATGCTGATCAGGCCCGGCTTAGT AAGAGACTGGGTGAAATAAAGGTTGATGTTCCCCTGGATGTAGAACTTGACGAGTGCCACCTTGGTAAGTTCCATAAAAA GAACATCAGGGAGTTATTTGAAAGACTTGAGTTTGCCAGTCTATTGAACAGGTTTAAAGAGAAAACGAGTATTAGTATTG ATGATATCTCTGTAAAAGAACTGGACAGGAAGGGGCTTGAAAATATCTGTGATAAAGCCCGGAATTTGGGAAAATTGGGG TTAACCTTAAGGCTTAATAATTATACTACCCCTGTCCGGGCTCATGCCAGCCAGGGAATAATTTCCCTGGGGGAAGGAAA CCTTTACATCTTTACTGATATAAATGAGGCCATAAGTATTTTAAAACCTATTTTGACAGATATTAGTGTTAAGAAATATA TTTTAAATTCCAAGGAATGTACTGTATTTTTAAAAAAACACGATATCGAGTTAGAAGGGCTTGTTTTTGATCCTTTACTG GCATATTACCTCCTCAAACCATCGGGTAAACTACCCGGCCTCAGGGACTTACTGGATCAGGAGTTAAGCCTGTCTCTACC TGAGGACATAAAAGAAGATAATCTGTATCTTGTTTTCATGGATAATATCTTCAAACTGGCTGAGGGTATGGTTCCTAAAC TTGAGGATATGGAGCTTATAGAATTATTTAATGATATTGAAATACCTTTAATTACAGTTTTAGCAGAACTGGAGTATAAT GGTATCAAAGTTGATGCTGAATACCTTGAAAGCCTTTCCCGAAAATGGGAAGAAGAACTAAATGGACTGGAGAGTAAAAT CCATGAGCTTGCCGGTGAAAAGTTCAATATTAATTCACCCAAACAGCTCGGGGGAATTCTCTTTGAAAAACTGGGGCTCC CGGTGATAAAGAAAACAAAGACTGGTTATTCTACAGGGGCTAAGGTCCTGGAAAAGCTGGAAGATAAACATCCGATAATA CCCTTGATTTCTGAATACAGGCAGCTTATGAAGTTGAAGTCAACCTATGTTGATGCCCTGCCTCCGATGATTAACCCCGA TACCGGGCGGCTCCACACCAGTTTTAATCAGATGGTTACTGCAACCGGGAGGTTAAGCAGTACTGAACCCAACCTTCAGA ATATTCCTGTAAGGACTGATGAGGGTCGAGAAATTAGACGGGCCTTTATTACAGAAAATGAAGACTGGGTCCTTCTGGCA GCAGATTATTCCCAGATAGAATTGAGGGTACTGGCCCATATCAGTGATGATGAAGGTTTAAAGGCAGCCTTTAACACCGG TCAGGATATTCATACCCAGACCGCCAGTGAGGTTTTTGAAGTTGAACCTGATGAAGTAACTCCAAATATGAGGCGGCATG CCAAGGTTATTAACTTCGGTATTGCTTATGGAATGAGCCCGTATGGACTGGCCCGGGACCTGGGTATTTCTAGACAGGAG GCCAGTGATTATATAAATAAATATTTTGAGAGGTTTACCGGGGTAAAAGATTATATGGAAAGGGTTGTAACTGAGGCCAA AACTAAAGGTTATGTAACCACTATTTTTAACCGGAGACGGTATATTCCCGAAATTAATAGTCGTAATTACCACCGGCGTT CATTTGCTGAAAGAACAGCAATAAATACTCCCATTCAGGGTACTGCTGCTGATATTATGAAACTGGCCATGATAAAAGTT TATAATCGTCTTAAAGAAAATGGCTCCCCGGCCCGGATTTTACTCCAGGTTCATGATGAGCTAATTCTTGAGGTGCCCCG GGAGGACCTTACTGAAATGGCCCGGATTGTTAAATCAGAGATGGAAAAAGCAGTTGATATGAAAGTCCCACTTGTGGTTA ACTTGGAGAGTGGTCCCAACTGGCTTAATAAAGAGGAATTAGATATAGAGTAA Protein sequence : MKKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFDKKAPTFRHKEYKEYKAHRKKM PEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMARKGEEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRY DLNKVRERYELEPQQLIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSGKKRKENLQKYADQARLS KRLGEIKVDVPLDVELDECHLGKFHKKNIRELFERLEFASLLNRFKEKTSISIDDISVKELDRKGLENICDKARNLGKLG LTLRLNNYTTPVRAHASQGIISLGEGNLYIFTDINEAISILKPILTDISVKKYILNSKECTVFLKKHDIELEGLVFDPLL AYYLLKPSGKLPGLRDLLDQELSLSLPEDIKEDNLYLVFMDNIFKLAEGMVPKLEDMELIELFNDIEIPLITVLAELEYN GIKVDAEYLESLSRKWEEELNGLESKIHELAGEKFNINSPKQLGGILFEKLGLPVIKKTKTGYSTGAKVLEKLEDKHPII PLISEYRQLMKLKSTYVDALPPMINPDTGRLHTSFNQMVTATGRLSSTEPNLQNIPVRTDEGREIRRAFITENEDWVLLA ADYSQIELRVLAHISDDEGLKAAFNTGQDIHTQTASEVFEVEPDEVTPNMRRHAKVINFGIAYGMSPYGLARDLGISRQE ASDYINKYFERFTGVKDYMERVVTEAKTKGYVTTIFNRRRYIPEINSRNYHRRSFAERTAINTPIQGTAADIMKLAMIKV YNRLKENGSPARILLQVHDELILEVPREDLTEMARIVKSEMEKAVDMKVPLVVNLESGPNWLNKEELDIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 8e-155 | 43 |
