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Name : Hore_04480 (Hore_04480) Accession : YP_002508201.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 483550 - 484425 bp Length : 876 bp Strand : - Note : PFAM: Integrase core domain DNA sequence : ATGTATCCCGGTCAGGATATTACAGCTGGGTTAAAAAGAAAACCTGGCAAAAGAGAGTTAACAAATAAAAAGTTAAAGTT GAAGATAGCTGAAATATACTGGCAGACCAGGGGAAGGTATGGTAGCCCCCGGATACATAAACAGCTTAAAAAAGAGGGTT ATCATTATAATATTAAGCGTATTGAACGACTAATGAGGGTAATGGGATTAAAAGCAATACAGAAAAGAAAGTTTAAAAGG ACAACTAATTCTGACAATAATCTCCCTTTAAAAAATAATCTTCTCAAACGTAATTTTAGCGTTACCCAACCTGATAAAGT CTGGGTATCAGACATAACATATATTCCAACAAAAGAAGGCTGGCTTTATCTTTCAGTAGTGATTGACCTCTATTCTCGCA GGGTTGTTGGTTGGTCAATGGACAATCATATGACAAAAAGGTTAGTGATTGATGCATTGGAAATGGCCGTACTAAATCGT AATCCCTCCAGGGGATTAATTTTTCATTCTGACAGAGGTAGTCAGTATGCCAGCCATGATTTTCAAAAAACACTGTGGAA ATACGGTATTATTTCATCAATGAGCCGCAAAGGTGATTGCTGGGACAATGCAGTAGCTGAAAGTTTTTTTGCAACACTAA AAACAGAATTGATTTTCCACAACAAGTTTGTAAGTCTATTTAACTCTAACATTTTCTCAAAAGTAAATCATTACTATCTG GCAAAATTCATATTTTTCCACTTCCACCTGCAATATTTATTGTCCACTACTGAGTGGAAATACCCGATAGTTACCTTTAT AATTTCATATAAGTTGAATGGTAAACTTTCTCTTGCTGGTTTTTATTTTAAAAATAAAAATATACTAAAAATCTAA Protein sequence : MYPGQDITAGLKRKPGKRELTNKKLKLKIAEIYWQTRGRYGSPRIHKQLKKEGYHYNIKRIERLMRVMGLKAIQKRKFKR TTNSDNNLPLKNNLLKRNFSVTQPDKVWVSDITYIPTKEGWLYLSVVIDLYSRRVVGWSMDNHMTKRLVIDALEMAVLNR NPSRGLIFHSDRGSQYASHDFQKTLWKYGIISSMSRKGDCWDNAVAESFFATLKTELIFHNKFVSLFNSNIFSKVNHYYL AKFIFFHFHLQYLLSTTEWKYPIVTFIISYKLNGKLSLAGFYFKNKNILKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-37 | 45 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 1e-37 | 45 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 2e-37 | 45 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-37 | 45 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 1e-37 | 44 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 1e-37 | 44 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 9e-37 | 44 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 2e-37 | 44 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 6e-36 | 43 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 1e-36 | 42 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-36 | 42 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-36 | 42 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 9e-33 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hore_04480 | YP_002508201.1 | integrase catalytic subunit | VFG1706 | Protein | 8e-38 | 45 |
| Hore_04480 | YP_002508201.1 | integrase catalytic subunit | VFG1631 | Protein | 5e-33 | 42 |
