Gene Information

Name : Hore_03290 (Hore_03290)
Accession : YP_002508085.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 338023 - 340008 bp
Length : 1986 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
TTGTTAACACAGATTGCCGATACTGTCAGAGGATTATCAGCAGATGCAGTAGAAAAAGCAAACTCTGGTCATCCGGGTCT
TCCCATCGGATGTGCTGATATAGGGGCTTTGCTCTATGGGAAGGTTATGAAATATGACCCGACTCAGCCGGAGTGGCCTG
ACCGGGATCGGTTTATCCTTTCAGCAGGCCATGGCTCCATGCTTGTATATTCATTACTCCATTTAGCCGGTTTTGAAGTT
AGTCTCGATGACCTTAAATCATTCCGTCAGTTAGGTTCCAAAACCCCGGGACATCCCGAATACGGAGAAACCCCCGGTGT
TGAAACCACAACCGGCCCTCTGGGTCAGGGCTTTGCCAATGCTGTAGGAATGGCTATTGCCGAAAGAATGCTGGCCCAGC
GCTTTAACACCGAAGGACATACCATAGTTGATCACTATACATATACCCTCCTCGGAGATGGCTGTATGATGGAAGGAATT
TCATCTGAAGCTGCTTCCCTGGCCGGTCACCTTGGCCTGGGAAAACTGATTGCCATCTATGATGACAATGAAATCTCCAT
CGGGGGTAGTACCGATATAACCTTTACCGAATCAGTAGCTGATAGATTTAAGGCCTATAACTGGCATGTCATTGAAGGGG
TAGACGGCCATGACCTTAAGGCTCTGGAAGAGGCCGTTAAAGAAGCTAAGGAGGCAAATGATAAACCCAGTTTAATAATT
GCTAAAACTAAAATTGCTTTCGGGGCTCCCACCAAAGAAGGGAGCAGTTCGGCCCACGGGGCTCCACTGGGTGAAGAAGA
GATAAGGGGATTAAAGAAAAATATCGGTTTCCCTGAAGATAAGGAATTCTATATCCCGGATGAGGTAAAAGAATTCTTTA
AGGACCATACCGAAAAGCTCAAAAAAGAACGTGAAGAATGGGAAAAAGCCTTTACTGAATGGGCTGAAGAAAACCCTGAC
CTGAAAGAAGAATGGGATAAGGCCCATAATCTCGAGCTTCCCGGAGACTTAGAAGAAACAATCAATAATCTTGAGATAAA
AACCCCCGTGGCTACCAGGAAGGCTTCAGGGGAGACTTTAAGAAAAATTGCCGATGAAATACCATACCTGGTCGGCGGTT
CAGCAGACCTGGCCCCATCCAATAAGACCTATTTAGATAAATATGGAGAGATACAGAAAGACAGCTTTGATGGGCGTAAC
TTCCGCTTCGGTGTCAGGGAGCATGCTATGGGAGCCATAGTAAACGGGTTATCCCTCCACAAAGGGGTAAGGCCCTTCTG
TGCTACCTTTTTAGTCTTCTCAGATTACATGAGGCCTGCTATCAGAATGGCTGCCTTAATGAAACAGCCTGTAATCTATG
TCTTTACCCATGACTCTGTATATGTAGGAGAAGATGGTCCTACCCACCAGCCTATCGAACATGTTGAAGCCCTGAGAGTG
ATACCTAATCTCAAAGTTTTAAGACCGGCTGATGCCGAAGAGACCAAAGCAGCCTGGCTTGAGGCTGTAAAGAGGACCGA
TGGACCTACAGCCCTGGTACTGACAAGACAGGGATTGCCCCATATTGAAAAAGAAGAGGGGATCGTAGGATTCAAACGTG
GTGGTTATATTGTCCACAAGGAAAAAGGAGATAGAACCGATGCTGTCCTTATGGCCAGTGGTAGTGAGGTTTCCCTGGCT
GTAGAGGTAGCTAAACTGCTTGAGGAAAAAGGTAAAGAGGTCAGGGTAGTATCTGTACCTGAGCGGCGGGAATTTGTAAA
CCAGGGTACAGAATATATAGAAGAAGTCCTCGGTAAGGATACTTTCAGGGTAGTCCTGGAGGCTGGAGTCGGAAATGGCT
GGTACCGTCTATTAGGTCATAAATGCCATGTGGTAAGCCTTGAGGATTTCGGTATGAGTGGTCCCGGGGAGGAAGTGGCC
CGTGAGCTTGGATTTGATGCTGAAAAGATTGCTTCTGATATCCTGGGAAATTATGAAAGACTGTAA

Protein sequence :
MLTQIADTVRGLSADAVEKANSGHPGLPIGCADIGALLYGKVMKYDPTQPEWPDRDRFILSAGHGSMLVYSLLHLAGFEV
SLDDLKSFRQLGSKTPGHPEYGETPGVETTTGPLGQGFANAVGMAIAERMLAQRFNTEGHTIVDHYTYTLLGDGCMMEGI
SSEAASLAGHLGLGKLIAIYDDNEISIGGSTDITFTESVADRFKAYNWHVIEGVDGHDLKALEEAVKEAKEANDKPSLII
AKTKIAFGAPTKEGSSSAHGAPLGEEEIRGLKKNIGFPEDKEFYIPDEVKEFFKDHTEKLKKEREEWEKAFTEWAEENPD
LKEEWDKAHNLELPGDLEETINNLEIKTPVATRKASGETLRKIADEIPYLVGGSADLAPSNKTYLDKYGEIQKDSFDGRN
FRFGVREHAMGAIVNGLSLHKGVRPFCATFLVFSDYMRPAIRMAALMKQPVIYVFTHDSVYVGEDGPTHQPIEHVEALRV
IPNLKVLRPADAEETKAAWLEAVKRTDGPTALVLTRQGLPHIEKEEGIVGFKRGGYIVHKEKGDRTDAVLMASGSEVSLA
VEVAKLLEEKGKEVRVVSVPERREFVNQGTEYIEEVLGKDTFRVVLEAGVGNGWYRLLGHKCHVVSLEDFGMSGPGEEVA
RELGFDAEKIASDILGNYERL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-122 48
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-116 47