Gene Information

Name : Hore_23350 (Hore_23350)
Accession : YP_002510075.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2554662 - 2555063 bp
Length : 402 bp
Strand : -
Note : PFAM: OB-fold nucleic acid binding domain; Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence : 
TTGCTTAACCGAGTAGTATTGATTGGTCGTTTGGTTAGAGATCCTGAACTCAGGTATACCAGTAATGGAACACCGGTAAG
CAACTTTACACTGGCAGTTGAACGTAATTACACAAACCAGCAGGGAGAGCGAGATGTAGATTTTATCAAGATTGTTACCT
GGAGGAAGCTTGCCGAGACATGTGCCCATCACCTGGGTAAAGGTAGATTAGTAGCAGTAGATGGTTCCCTGCAGATAAGA
AAAAGCGAAAGAGATGGTAGGACCTATTATAATCCAGAAGTGGTTGCTGATAATGTCCGTTTCCTGGATTGGCCAAGTGA
TAACAACAGGAATAAATCCAGAGATGACATAAATGAAGAGGAAGTCTTTGATATAGATGATGAGTTCGATGTACCGTTTT
AA

Protein sequence : 
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAETCAHHLGKGRLVAVDGSLQIR
KSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEEEVFDIDDEFDVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-25 56
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-24 55
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-24 55
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-22 54
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 6e-23 51
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-21 44
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-21 44
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-19 43