Gene Information

Name : Hore_23250 (Hore_23250)
Accession : YP_002510065.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2544146 - 2544850 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCATTACTGGAACTTAACGGCATCAAGAAAATTTATCAGCAGGGTAAGGTAGAGGTACCTGCTTTAAGAGGGGTTGA
CCTTAAAGTTGAAGAGGGTGAATTTACCACTATTTTTGGCCCATCAGGGTCAGGTAAAACCACTCTTTTAAATATGATAG
GCTGCCTGGACAGGCCTACTGAAGGGCAGGTGTATTTCAATGGGGATACACTTAGTAATCTTTCGGAGAAAGAACTGGCC
ATGCTCAGACGGTTTAATATCGGTTTTATTTTTCAAAGCTATAATTTAATTCCGGTCTTGAGTGCCTATGAAAATGTTGA
GTTTGCCCTCCGTTTAGTGGAAGGTAATAAAGAAAAAATAAGGAATAAGGTCCTGGATATTCTGGAGGCCGTAGGCCTTA
AAGGTCTGGAAGATCGAAAACCCAATGAGCTTTCGGGGGGACAGAAACAGCGGGTAGCTATTGCCAGGGCTCTGGTTAAA
CATCCCAAACTGGTCCTGGCCGACGAGCCAACAGCTAACCTTGATTCTCAGACCAGTGAAGATGTCCTGAAGGTAATGCT
TAAGATGAATGAAAAATTCAAGACTACTTTTATTTTTTCCACCCATGACCCCCGGGTTATGAATTATGCCCGGAGGCTAA
TTGAAATCAGGGATGGTCGGGTTACCAGGGATGAAAGGAGGAAAGGCCAGGATGTTTCTGGTTAA

Protein sequence : 
MSLLELNGIKKIYQQGKVEVPALRGVDLKVEEGEFTTIFGPSGSGKTTLLNMIGCLDRPTEGQVYFNGDTLSNLSEKELA
MLRRFNIGFIFQSYNLIPVLSAYENVEFALRLVEGNKEKIRNKVLDILEAVGLKGLEDRKPNELSGGQKQRVAIARALVK
HPKLVLADEPTANLDSQTSEDVLKVMLKMNEKFKTTFIFSTHDPRVMNYARRLIEIRDGRVTRDERRKGQDVSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hore_23250 YP_002510065.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 6e-41 48
Hore_23250 YP_002510065.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-44 45
Hore_23250 YP_002510065.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-37 45
Hore_23250 YP_002510065.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-41 44