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Name : Hore_21060 (Hore_21060) Accession : YP_002509846.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2285245 - 2286513 bp Length : 1269 bp Strand : - Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGTTAGATATGAAGTTCATCAGGGAAAATCTTGAAACCGTGGCTGATATGCTTAAAAGAAGAGGGACTGAAGCCCCCCT CGATGAATTTAAGGAACTGGATGAGAAAAGGAGGGAAATTATTCAGGAAGTAGAACAGTTAAAACACAAACGGAATGTTG TTTCCAGTAAAATTGGGGAGTTAAAAAGGGCCGGTGAAGATGCCAGTGATATTATTGCAGAGATGAAAGAGGTTTCGGCC ACTATTAAGAAATATGATGAGGAATTAAGAGGGATAGAAGAGAGATTACAGCAGGTTGTTTTATCTATACCAAATATGCC CCATGACAGCGTTCCTGTGGGAGAAGATGAAGATGATAATGTAGAGGTTCGGCGCTGGGGTGAACCCCGCAAGTTTGATT TTGAGTTTAAACCCCACTGGGACCTTGGAGAAGCACTGGATATTCTCGACTTTGAAAGGGGTAGCAAGGTATCTGGAGCC AGGTTTACCTTCCTTAAGGGAGCCGGTGCCCGTCTGGAAAGAAGCCTGATTAGTTTTATGATTGACCACCATACCCAAAA TGGTTATACGGAGATATTTCCACCTTTTATGGTAAACAGTGATAGCTGTATCGGAACCGGACAGTTACCAAAATTTGCCG GCGATATGTTTAAGGTTGAGGGAACCGATTATTACCTTATTCCAACAGCAGAAGTGCCTGTAACCAATCTTTACCGGGAT GAAATATTGAATGCTGAAGACCTTCCAGTATATCATGTTGCTTACAGTGCCTGTTTCAGAGCAGAAGCCGGAGCCCATGG ACGGGATACAAGGGGAATTATCAGACAGCATCAGTTTAATAAGGTAGAACTGGTTAAATTTGTTCATCCTGATAAATCTT TTGAGGAATTAGAAAAGCTGACCCGTAATGCTGAGGAAATATTACAGATGCTAGAGCTTCCCTACCGGGTAGTTACTCTC TGCACCGGTGATTTAACCTTCTCCTCGGCCAAAACCTATGATATTGAGGTCTGGATGCCGGCCTATGATACCTATCGGGA GATTTCTTCCTGCAGTAACTTTAAAGACTTTCAGGCCAGGCGGGCTGGAATCAGATTCAGGCCTGAGCCAGGGGCTAAAG CCGAGTATGTCCACACTCTGAATGGTTCGGGGCTTGCTATTGGCAGAACGGTGGCTGCCATTATGGAAAATTACCAGAAT GAAGACGGGAGTATTACTGTACCTGAAGTGTTAAGACCCTATATGGGTATGGATGTAATTAAACCTTAA Protein sequence : MLDMKFIRENLETVADMLKRRGTEAPLDEFKELDEKRREIIQEVEQLKHKRNVVSSKIGELKRAGEDASDIIAEMKEVSA TIKKYDEELRGIEERLQQVVLSIPNMPHDSVPVGEDEDDNVEVRRWGEPRKFDFEFKPHWDLGEALDILDFERGSKVSGA RFTFLKGAGARLERSLISFMIDHHTQNGYTEIFPPFMVNSDSCIGTGQLPKFAGDMFKVEGTDYYLIPTAEVPVTNLYRD EILNAEDLPVYHVAYSACFRAEAGAHGRDTRGIIRQHQFNKVELVKFVHPDKSFEELEKLTRNAEEILQMLELPYRVVTL CTGDLTFSSAKTYDIEVWMPAYDTYREISSCSNFKDFQARRAGIRFRPEPGAKAEYVHTLNGSGLAIGRTVAAIMENYQN EDGSITVPEVLRPYMGMDVIKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-130 | 63 |
