Gene Information

Name : Hore_20240 (Hore_20240)
Accession : YP_002509764.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 2184448 - 2184927 bp
Length : 480 bp
Strand : -
Note : PFAM: Uncharacterized ACR, COG1576; TIGRFAM: conserved hypothetical protein TIGR00246

DNA sequence :
ATGAAGATTAATATTATGGCGGTAGGAAAAATAAAGGAGGACTACATTAATGCTGGAATAAAAGAATTTTTAAAAAGACT
AAAGCCCTATACCGAAGTAAATGTAATCGAGGTAGATGATGAAAGAATCCCTCCCAATGCCAGTGGAGCCCAGATAGAAA
AAGTCAAAGAAAAAGAAGGGGAGAGGCTATTAAAGAATGTCCCCAAAAACTCCTATGTTATCGTACTGGATGTTAAAGGG
AAGCCAATGACTTCAGAGGGACTGGCTAAATCTATTCAAAATCTGCAATTGCAAGGTTACAGTAATATAACTTTTATTAT
TGGAGGGGCCCTGGGGTTAAGCCAGAAGGTCCTGGATACCGGAGATTATATTTTATCATTTTCCCATATGACTTTTACCC
ACCAGATGATAAGGCTGATATTGCTGGAGCAGTTATATCGTGCTTTTAAAATAATTAAAGGTGAACCGTATCATAAATAA

Protein sequence :
MKINIMAVGKIKEDYINAGIKEFLKRLKPYTEVNVIEVDDERIPPNASGAQIEKVKEKEGERLLKNVPKNSYVIVLDVKG
KPMTSEGLAKSIQNLQLQGYSNITFIIGGALGLSQKVLDTGDYILSFSHMTFTHQMIRLILLEQLYRAFKIIKGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-43 58
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-43 58
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-42 57
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 7e-37 55
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 7e-28 55
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-40 54
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-40 54
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-40 54
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-40 54
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-40 54
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 7e-40 54
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-40 54
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-40 54
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-40 54
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-40 54
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-40 54
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-40 54
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-40 54
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-41 53