Gene Information

Name : Hore_18930 (Hore_18930)
Accession : YP_002509636.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2023041 - 2023766 bp
Length : 726 bp
Strand : -
Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase

DNA sequence :
ATGAATGTTATAGCGGTAATTCCAGCCCGTTTTTATTCAAGCCGTTTTCCCGGCAAACCACTGGCCGATATTAAAGGAAA
ACCAATGATTGAACATGTATACCGGCGTGTTTGCCGGGTTAAAGGTCTGAAAGAAGTCTATGTTGCCACTGATGATGACA
GGATTTACAATACTGTTAAGGATTTCGGGGGCAATGCAGTTATGACTTCAAAAGCTTGTAGTTCAGGGACTGACCGGGTT
GCTGAGGTTGTTGCTAATTTAGACTGTGATATTGTGGTTAATGTCCAGGGTGATGAACCCCTGCTGGAACCACTGATGGT
GGAGCAGGCTCTCAAACCCTTTGCAGAGGAGAAAAACCTTAACATGAGTACCCTGATGAAAGAGATCGGGGACCCCGGAG
AGGTAGAAAATCCCAATGTGGTTAAGGTAGTAGTTGATAAGGATGGATATGCCCTGTATTTTTCCCGGTCACCGATTCCC
CACCCCCGGAACAGTGGGGCCCGGTATTATAAACATATTGGATTATATATATACAGACGCAAATTTTTAATGAATCTGAC
CCAGATGGAGCAGACAGAACTGGAGAAGGTTGAATCCCTGGAACAGCTCAGGGTTTTAGAAAATGGTTATAAAATTAAAG
TTGTGGAGACTGAATTTGACTCGATTGGTGTTGATACTCCTGAAGATATAGCCAGGGTGGAAAAAATTATGGAGGGGTGT
AATTAA

Protein sequence :
MNVIAVIPARFYSSRFPGKPLADIKGKPMIEHVYRRVCRVKGLKEVYVATDDDRIYNTVKDFGGNAVMTSKACSSGTDRV
AEVVANLDCDIVVNVQGDEPLLEPLMVEQALKPFAEEKNLNMSTLMKEIGDPGEVENPNVVKVVVDKDGYALYFSRSPIP
HPRNSGARYYKHIGLYIYRRKFLMNLTQMEQTELEKVESLEQLRVLENGYKIKVVETEFDSIGVDTPEDIARVEKIMEGC
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-42 47
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-42 47
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-42 47