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Name : Hore_18700 (Hore_18700) Accession : YP_002509614.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1997576 - 1999120 bp Length : 1545 bp Strand : - Note : PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E DNA sequence : ATGGATAAGACAAACATGGATTACGAAAATATTAATAGTCTAGAGGTCAGTGAGATAAATAATTTTTATATAGACAATAA GTTAATCAGAAATTTCCCTGGCTCAACTTTAAAAGAAAACAGGCTAATTCCCCTGACCAGACATGGTGACACTGTAGTAG TTATTTCCGATAATTACCCTCCCCCTGAGGCAATCAATGACCTGGAAGTATATACAGGGTTTAAAATAGATGTCAGGTTA GAAAAATCTCATGTGGTTCAACAGCTTGTAAATGAACACCTTAAGGCTCCGGTGGATACAGTAGAAGATATGCTTGATGA TAATAATTTGCGGGGTCTGGATGATTTCAAGATCCTAAAAATTGATAGCCGGGTTGAAAACCTGGAGGATTTAGCCCAGG AAGCCCCAATAATCAGACTGGTTAATGCCATCATCACTACTGCCTTGAAGAAGGGAGCAAGTGATATCCATATTGAACCC TTTGAAGACAAATTAAGGTTAAGGTACAGAATAGACGGTGTTTTATATGAGAATCCTGCCCCGCCACTGGAGTTGTTACC GGCTATCATTACCAGGATAAAAATTATGTCTGAATTAAATATTGCTGAAAGACGGCTTCCTCAGGAAGGTAGAATCAGAA TCAGGGTATCGGGTCGGGAGCTTGATATAAGGGTGTCTATTATTCCTGCTCTCCATGGGGAAGGAGTTGTCCTCAGGTTA CTTGATAAAGCAGCCCGGTTACTTGATATCAAAAACCTCGGCTTTAGCGAGGCTATGTTAAAAAGGTATTTGAACCTTAT TAATATTCCTCATGGCATTATTCTGGTGACAGGTCCGACCGGAAGTGGTAAGACAACAACCCTTTATGCAACCTTACAGT ATTTGAATTCATCAAGTCGAAAGATAATTACCATTGAAGACCCGGTTGAATACCAGTTAGAGGGAATTAACCAGATACAG GTAAAACCGGAGATTAACTTCGATTTTGCCTCTGGTCTACGATCTATTTTGCGACATGATCCCGATATTATTATGATAGG TGAAATCAGAGATGTGGAAACAGCTAAAATTGCCATTCAGGCAGCCCTGACAGGCCATCTGGTCCTGGCAACTCTCCATA CCAATGATGCTGCCGGTGCTGTCTCGAGATTACTTAATATGGGGGTTGAAGATTACCTGCTGGCAGCAACCCTGAAAGGG ATACTGGCCCAACGTCTTGTCAGGGTTTTATGCCCCAGGTGTAAGGAGTCCTATCAACCTACATCTTCAGAAGTTAACCT GATTGATGATGATGTAGAGTTATTATACCGTCCGGCGGGTTGTACCTTCTGTAATAATATAGGTTTTAAGGGGCGGACGG GTATTTATGAATTATTAACTGTAACCCCCCAGATTGAATCAATGATTGTCCAGAGGGCCAGCTCAAGTGAGATTAAAGAA GAGCTTAAAAAAACAGGTTATACCAGTCTGTTCACCGACGGTTGTATCAAGGTAAAAGACGGTTTAACTTCCATAGATGA AGTGGTCAGGGTTACAACCCAGTAA Protein sequence : MDKTNMDYENINSLEVSEINNFYIDNKLIRNFPGSTLKENRLIPLTRHGDTVVVISDNYPPPEAINDLEVYTGFKIDVRL EKSHVVQQLVNEHLKAPVDTVEDMLDDNNLRGLDDFKILKIDSRVENLEDLAQEAPIIRLVNAIITTALKKGASDIHIEP FEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELNIAERRLPQEGRIRIRVSGRELDIRVSIIPALHGEGVVLRL LDKAARLLDIKNLGFSEAMLKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSSRKIITIEDPVEYQLEGINQIQ VKPEINFDFASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTNDAAGAVSRLLNMGVEDYLLAATLKG ILAQRLVRVLCPRCKESYQPTSSEVNLIDDDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASSSEIKE ELKKTGYTSLFTDGCIKVKDGLTSIDEVVRVTTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-86 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-86 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG0182 | Protein | 1e-91 | 53 |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG2048 | Protein | 2e-88 | 49 |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG1876 | Protein | 2e-89 | 47 |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG2426 | Protein | 5e-75 | 46 |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG0233 | Protein | 3e-73 | 45 |
| Hore_18700 | YP_002509614.1 | type II secretion system protein E | VFG0112 | Protein | 2e-87 | 42 |
