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Name : Hore_16980 (Hore_16980) Accession : YP_002509442.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1816782 - 1818245 bp Length : 1464 bp Strand : - Note : PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family; short chain dehydrogenase; NAD dependent epimerase/dehydratase family; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain DNA sequence : ATGAAAAATTTATTAATTATAGGAGCTGGAAGTGCCGGTAAGCTTGTTCTTGAGGAAATTTTAAAAAATAACGAGAGCTA TAATTATAATATAATTGGTTTTTTAGACGCTGATATTAATAAGCATGGGACAAGCATTCATGGCTATAAAGTTTTAGGTC ATCATGATAATATTTCCTTTTATATTGATCAATACAGTGTTGATGAAGTTATAGTAGCCACTACAGAAATTGACCGTGCT GGATTAGAAAAAATATACCAAAACACAAAGAAATTTCAAATTGGGATAAAAGTTTTACCAACCCTTCAAGAGTTACTTAT GGAAGAACCTTTCACTAAACAATTGAGAGAAGTAAGGGTAGAAGATTTATTAGGTAGAGAGCCTGTAAAAATTAATAGTG ATAACATCTATAAATATATCAATCATAAAAAGGTGTTGGTTACTGGGGCTGCTGGATCAATAGGAAGTGAACTTTGTCGC CAGATTGCTAAATATGATCCCCGGGAGTTAATAATATTAGACATAAATGAAAATGAACTCTATTTTTTAAATCTATTTTT AAAAAGACATTATAATTTAAATGTCAGTTTAGAAATATGTAATATAAGGGAAAAAAGCAAATTAGAATATTTATTTAACT ATTACAAACCTCAGCTTGTATTCCATGCTGCAGCCCACAAACATGTACCATTAATGGAAAAAAATATAGATGAAGCTATA AAAAATAATGTTTTTGGTACTAAAAACCTGCTGGATCTTTCTGACAAATATGGAGTGGAAAAGTTCGTTTTAATATCAAC TGATAAAGCCGTTAATCCTACCAATGTTATGGGGGCTACTAAACGTTTATCAGAAATTATGTTGGAGAAGATCAATAAAT ATTCTAAAACCCAGTACATGGCAGTAAGATTTGGAAATGTCTTAGGAAGTAATGGCAGTGTGGTACCTTTATTTAAAACT TTAATTAAAGAGGGTAAAGATTTAACAGTTACCCATGAAGAGGCAACCCGTTACTTTATGACCATACCGGAAGCTGTCCA ACTTGTCCTTGAAGCTGGTTTTATAGGTAAAGGGGGAGAAGTTTTTGTTCTGGATATGGGTGAACCTGTTAAAATAATAG ATTTAGCTAAAAAGATGATTGAGTTGTCAGGTTTAACCCTGGGTAGGGATATTAATATAAAAATTACTGGTTTAAGGCCT GGTGAAAAATTACATGAAGAACTTATGCATGATATTAACTCTTGTGAAAAGACACAGAATAAAAAAATATATATTGCAAA GATAAGAGAAGAAAATGTAGATATAGAAAAAGGTTTACAGGATTTAAAACGATATTTGATGTCTTTTGACAGAAAAAAAC TGGTAAAAAAGCTTAAAGAATTGGTACCTACTTATAAAGACAATAGTTATAGTGAGGAGAATATAGATGGAAGACAAACT AAATATTCCGTTATCAGTACCTAA Protein sequence : MKNLLIIGAGSAGKLVLEEILKNNESYNYNIIGFLDADINKHGTSIHGYKVLGHHDNISFYIDQYSVDEVIVATTEIDRA GLEKIYQNTKKFQIGIKVLPTLQELLMEEPFTKQLREVRVEDLLGREPVKINSDNIYKYINHKKVLVTGAAGSIGSELCR QIAKYDPRELIILDINENELYFLNLFLKRHYNLNVSLEICNIREKSKLEYLFNYYKPQLVFHAAAHKHVPLMEKNIDEAI KNNVFGTKNLLDLSDKYGVEKFVLISTDKAVNPTNVMGATKRLSEIMLEKINKYSKTQYMAVRFGNVLGSNGSVVPLFKT LIKEGKDLTVTHEEATRYFMTIPEAVQLVLEAGFIGKGGEVFVLDMGEPVKIIDLAKKMIELSGLTLGRDINIKITGLRP GEKLHEELMHDINSCEKTQNKKIYIAKIREENVDIEKGLQDLKRYLMSFDRKKLVKKLKELVPTYKDNSYSEENIDGRQT KYSVIST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-71 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-68 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hore_16980 | YP_002509442.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 3e-72 | 45 |
