Gene Information

Name : Hore_16860 (Hore_16860)
Accession : YP_002509431.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1806065 - 1807378 bp
Length : 1314 bp
Strand : -
Note : PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: flagellar protein export ATPase FliI; type III secretion apparatus H+-transporting two-sector ATPase; ATPase FliI/YscN family

DNA sequence :
ATGAAGGGGATTGATTTTTCCCAGCTGACTTCAGTTGTAGACAGGGCCCGGGTGACCAGAAACTATGGCCATATAACCCG
GGTAGTTGGTTTAATTATAGAGTCCAAAGGACCAGAAGTCAGTATTGGAGAAATATGTTTAATAAAAAACGGTAAACGGT
CTGTTAAGGCAGAAGTGGTTGGATTTGATAAGGATAAGGTCTTATTAATGCCCATCGGGGAAATGAGGGGAATAAACCCC
GGGGCCAGGGTCGTGGCCACCGGTGAAAAATTGACAGTTAAGGTCGGGGAAGGCCTGCTGGGACAGGTATTAAACGGTCT
GGGCCAGCCTATCAGTAGTGGTTTAAAAATGAGGCATGGTTTTACTGAAGTCCCCGTCATGGCCCAGCCCCCCGATCCCC
TGTTGAGAAAAAGAATTACTGAACCTTTAAGCCTTGGAATCCGTAGCATTGACGGTCTTTTAACCTGTGGCCGGGGGCAG
CGTGTCGGTATTTTTGCCGGTAGTGGTGTCGGTAAAAGTACCCTGCTGGGAATGGCTGCCCGTAACACCGAGGCAGACAT
TAATGTTATTGGACTTGTTGGCGAACGTGGCCGTGAGGTCCGCGACTTTATTGAAAGGGACCTCGGTCCTGAGGGTTTAA
AAAAGTCAATTGTGGTCGTTGCCACCTCGGATAAGCCAGCCCTGGTCAGGGTTAAGGCTGCCTATGTAGCCACTGCTATT
GCTGAGTTCTTCCGTGACCAGGGGAAAAATGTCCTCTTAATGATGGATTCGGTAACAAGGGTGGCTATGGCCTTCCGTGA
AGTGGGTCTAGCTGTTGGTGAACCTCCAGCTACCAGGGGTTACCCCCCTTCGGTCTATGCTGAATTACCCAAACTCCTGG
AAAGAGCGGGGACAAACCAGCATGGCACCATTACAGCCCTCTATACGGTATTAGTCGAAGGTGATGACTTTAATGAACCC
GTTTCTGATACGGTCCGGGGTATTCTGGATGGCCATATTGTGTTATCCCGGGACCTGGCTTCAAGGAATCATTATCCGGC
TGTAGATGTCCTGGAGAGTGTCAGCCGTTTGATGCCTGATATTGTAGATGAAGAGCATTTGCAGGCGGCCGGTGAGGTTA
AGAAAATGCTGGCTGATTATCGAGAATCAGAAGACCTGATAAATATCGGGGCCTATAAACCGGGTAGTAATCCGGCCATT
GACAGGGCCCTTGAAAATATAAATGATATTAATACCTTCCTGAGACAGGGTATTGGCCAAAAGTCCAGTTTTGAAGAAAC
GGTAACTATGTTAAAGCAAATTGCTGGAAAGTAA

Protein sequence :
MKGIDFSQLTSVVDRARVTRNYGHITRVVGLIIESKGPEVSIGEICLIKNGKRSVKAEVVGFDKDKVLLMPIGEMRGINP
GARVVATGEKLTVKVGEGLLGQVLNGLGQPISSGLKMRHGFTEVPVMAQPPDPLLRKRITEPLSLGIRSIDGLLTCGRGQ
RVGIFAGSGVGKSTLLGMAARNTEADINVIGLVGERGREVRDFIERDLGPEGLKKSIVVVATSDKPALVRVKAAYVATAI
AEFFRDQGKNVLLMMDSVTRVAMAFREVGLAVGEPPATRGYPPSVYAELPKLLERAGTNQHGTITALYTVLVEGDDFNEP
VSDTVRGILDGHIVLSRDLASRNHYPAVDVLESVSRLMPDIVDEEHLQAAGEVKKMLADYRESEDLINIGAYKPGSNPAI
DRALENINDINTFLRQGIGQKSSFEETVTMLKQIAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-104 54
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-99 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-99 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-99 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-98 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-99 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-96 53
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-96 53
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-93 53
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-93 53
escN AAK26715.1 EscN Virulence LEE Protein 1e-93 53
escN AAL57542.1 EscN Virulence LEE Protein 1e-93 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-98 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-98 52
escN AAC31513.1 L0034 Virulence LEE Protein 1e-91 52
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-91 52
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-93 52
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-91 52
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-91 52
escN AAC38383.1 EscN Virulence LEE Protein 2e-91 52
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-91 52
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-91 52
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-93 52
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-89 51
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-89 51
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-83 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-83 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-83 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-84 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-84 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-86 48
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-83 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-68 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-78 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-82 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-77 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-77 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-71 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-71 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-70 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-72 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-75 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 4e-75 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-75 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-75 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 6e-71 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-67 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-67 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-70 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-73 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0048 Protein 6e-105 56
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0390 Protein 9e-103 56
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG2144 Protein 9e-107 55
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0192 Protein 3e-103 55
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0812 Protein 6e-92 52
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-91 52
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG1254 Protein 6e-93 51
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-83 50
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG2331 Protein 9e-90 47
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG2499 Protein 9e-89 45
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG1008 Protein 5e-73 44
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG1778 Protein 2e-76 44
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG0555 Protein 2e-75 43
Hore_16860 YP_002509431.1 flagellar protein export ATPase FliI VFG2459 Protein 1e-77 42