|
Name : Hore_16440 (Hore_16440) Accession : YP_002509388.1 Strain : Halothermothrix orenii H 168 Genome accession: NC_011899 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1766491 - 1769028 bp Length : 2538 bp Strand : - Note : PFAM: Helicase conserved C-terminal domain; SEC-C motif; SecA Wing and Scaffold domain; SecA preprotein cross-linking domain; SecA DEAD-like domain; TIGRFAM: preprotein translocase, SecA subunit DNA sequence : TTGTTAAAATTTATAAAAAATATCTTTAAAGATTCAAATACCCGGGAACTGGAAAAATTACAGCACATTGTTGATGAGAT TAACAGTCTTGAACCCTATATGAAGAAGCTTTCAGATGAGCAATTGAGGGATAAAACCAGAGAATTTAAGGAACGGATTG TAAAAGGTGAAACCCTTGATGAATTATTACCGGAAGCCTTTGCTGTAGTCCGGGAAGCGGCCCAGAGGTCTACTTCAGAA AAATTCAGACACTATGATGTCCAGCTTATGGGTGGTATTGTGTTACACCAGGGTAAAATTGCCGAAATGAAAACCGGTGA GGGGAAAACCCTGGCTGCCACTTTGCCGGTATATCTCAATGCCCTGACCGGTAAAGGTGTTCATGTGGTTACTGTTAATG ACTATCTTGCTAAAAGGGATAGTGAATGGATGGGACAAATATACCGGTTTTTAGGCCTGTCTGTTGGTGTTATTTTAAAC GGGATGACTCCCCGGGAAAGAAAAAAGGCCTACCAGGCAGATGTAACCTATGGTTCCAATAATGAATTTGGGTTTGACTA TCTCCGTGATAACCTGGCCTATAATCCTGATGATGTCGTACAGGGGGAACTACATTATGCCATTCTTGATGAAGTTGATA GTATTCTAATAGATGAAGCCAGGACCCCCCTTATTATTTCAGGGCCGGCTCAGGAGACAACTAAAGATTACCGGAAGTTT AACCGGATTATCCCCAGGCTTGTAAAAGGTAGGGACTATGAGGTTGATGAGAAAAACAGGACCGTCCATTTAACAGAAGA GGGCCTGGCCCGGGTGGAAAAAAAGTTAAATATCTCAAACCTCTATGATGATCAAAACTTCCAGCTTGCCCATCAGCTAA ATCAGGCCTTAAAGGCCCATACCCTGATGAAAAAAGACCGGGATTATATTGTTAAAGATGGAGAAGTTAAAATTGTAGAT GAATTTACCGGACGAATTATGGAAGGCAGGAGGTTTAGTGAAGGGCTCCACCAGGCCATAGAGGCTAAAGAGGGTGTTGC CGTCAATAAGGAAAGCCAGACGTTTGCCAGTATAACCTATCAGAATTTTTTCAGAATGTATGATAAACTGGCCGGTATGA CCGGTACGGCAGCCACTGAAGAAGAAGAGTTTATTAAAATCTATGGCATGGAAGTTGTCCAGATACCTACCAATAAACCA ATGATCAGGGAGGACCTTCCTGATGTTGTATTCAGGACCGAGGAGGCCAAGTTTAAAGCTGTTGCTGAAGAAGTAGCCCT TAAATATAAAAAAGGACAACCGGTCCTGGTCGGTACTGTTGATATCGAAAAATCGGAAAAGTTAAGTAGAATGCTGAAGA GAAAAGGTATTCCCCACCAGGTCCTGAATGCCAAGAACCATGAAAAGGAAGCAGAAATTATTAAAAAGGCCGGTCAAAAG AATAGTGTTACCATTTCTACAAATATGGCCGGGCGTGGTACGGATATTGTGCTCGGTGAAGGTGTAAAAGAATTGGGAGG ACTCCATGTCATCGGAACCGAAAGACATGAAAGCCGCCGTATCGATAACCAGTTGCGGGGGCGTTCCGGAAGGCAGGGAG ATCCCGGTTCATCCCAGTTTTTCGTATCACTGGAGGATGACCTCCTGAGATTGTTTGGCTCTGATAATATAAGTATGTTA ATGGACCGGATGGGATTTGATGATGACCAGCCCATTGAGCATAAAATGATAACAAGATCCCTGGAAAGGGCCCAGAAAAA GGTCGAAGGAAGAAATTTCGAAATACGTAAGACCATCCTTGAATATGATAATATTATGAATAAACAGCGGGAAATAATCT ATGAGCAGAGGAAGAAAATCCTCTTTGCATCTGACCTCAAGGAGTATATAATGGGTATGATAGAAATGCTGGTTGATGAT ATTATGGATACCTATCTTTCCAGTGAGGTCCATCCCGATGACTGGGATATAGACGGTCTGATTAAATACCTGTCTGAATT TAATCTGGTCAATATTAATGAAGAGGACTTCAAGGATAAGGATCGGGAAAAAATAAGAGAAGAATTAATTAAAATTGCCA CAAAAACCTATGAAGAAAAAGAAGCTGAGATAGGTAAGGAGTCCATGCAAAAGCTGATCAAGAACCTGGCCCTCAGAATC ATTGACCGGAACTGGATGAATCACCTGGATAATATGGATGAATTGAGACAGGGTATTGGTTTAAGGGCATATGGCCAGCG GGACCCGTTAACAGAATATAAATTTGAATCCTATGATATGTTTAATGGTATGACGGGAACTATCAGGGAAGAGATAATTA AAAACTTATTCCGGATTGAAGTAAAGGAACGGGAAATAAATTTAGATCCCATTATGTTAAAGAGGTTGAAATACCGCCGT AACTTTTTATCAAACCGGGCAAACAGGCCCCAAAAGAAGGCTAAAAGACAGCCCATTGTAAAACCTGATAAACCTGGGAG AAATGATCCCTGCCCCTGTGGTAGTGGCAAAAAGTATAAACACTGTTGTGGGAGGTAA Protein sequence : MLKFIKNIFKDSNTRELEKLQHIVDEINSLEPYMKKLSDEQLRDKTREFKERIVKGETLDELLPEAFAVVREAAQRSTSE KFRHYDVQLMGGIVLHQGKIAEMKTGEGKTLAATLPVYLNALTGKGVHVVTVNDYLAKRDSEWMGQIYRFLGLSVGVILN GMTPRERKKAYQADVTYGSNNEFGFDYLRDNLAYNPDDVVQGELHYAILDEVDSILIDEARTPLIISGPAQETTKDYRKF NRIIPRLVKGRDYEVDEKNRTVHLTEEGLARVEKKLNISNLYDDQNFQLAHQLNQALKAHTLMKKDRDYIVKDGEVKIVD EFTGRIMEGRRFSEGLHQAIEAKEGVAVNKESQTFASITYQNFFRMYDKLAGMTGTAATEEEEFIKIYGMEVVQIPTNKP MIREDLPDVVFRTEEAKFKAVAEEVALKYKKGQPVLVGTVDIEKSEKLSRMLKRKGIPHQVLNAKNHEKEAEIIKKAGQK NSVTISTNMAGRGTDIVLGEGVKELGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSQFFVSLEDDLLRLFGSDNISML MDRMGFDDDQPIEHKMITRSLERAQKKVEGRNFEIRKTILEYDNIMNKQREIIYEQRKKILFASDLKEYIMGMIEMLVDD IMDTYLSSEVHPDDWDIDGLIKYLSEFNLVNINEEDFKDKDREKIREELIKIATKTYEEKEAEIGKESMQKLIKNLALRI IDRNWMNHLDNMDELRQGIGLRAYGQRDPLTEYKFESYDMFNGMTGTIREEIIKNLFRIEVKEREINLDPIMLKRLKYRR NFLSNRANRPQKKAKRQPIVKPDKPGRNDPCPCGSGKKYKHCCGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-119 | 42 |
