Gene Information

Name : Hore_00870 (Hore_00870)
Accession : YP_002507843.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 104235 - 106655 bp
Length : 2421 bp
Strand : +
Note : PFAM: UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); Clp amino terminal domain; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTCGGGAGATTTACTGAAAGAGCAAGAAAAGTTTTAAGTCTGGCCGAAAAAGAAGCTGTTGGCTTTAAACATAACTA
TGTAGGCACAGAGCATATTTTGCTGGGTCTGGTTAAAGAAGGGCAGGGAGTTGCTGCAAAGGCTCTAAAAGATGTTGGTA
TCTCTGAAGAAAAAGTTAAGGAGCAGATAACCAAGTTGATCGGTGAGGGAAATCAGGAGGTGAGTGGACCTATCAGTCTT
ACCCCCCGGAGTAAAAAGGTCCTCAACCTGGCTCTGGATGAGGCCAGGCGTCTCGGTCATAACTATATTGGAACCGAGCA
TATCTTGCTGGGATTAATTAGAGAAGGAGAAGGTGTAGCTGTTAGAATCCTGGCAAATCTTAATAATGGTGACCTCCAAA
ATATCAGGGAACAGGTAATTGAGTTACTTGGTGGTAAAGGGAATACCCGCCATCAGGATGGAACCAGGAGGAGTGAAACC
CCTAATTTAGATGAATATAGCAGGGATTTGACCAAACTGGCTGATCAGGTTAAGCTTGATCCGGTCATCGGACGCGAAAA
GGAAATAGAAAGGGTCATTCAGGTTTTAAGCAGGAGAACCAAGAATAACCCGGTTTTAATCGGAGAGCCCGGGGTTGGTA
AAACCGCCATTGTGGAAGGTTTGGCTCAGCGTATTGTCGATGAAAGTGTTCCTGATGTATTACTGAATAAAAGGGTAGTT
GCTTTAGATTTAAGTTCAATTGTAGCCGGTTCTAAATACAGGGGTGAATTTGAAAAGAGACTTAAGGCTGTTATGAATGA
TATAGTGAAAAGTGGTAATATTATTCTATTTATTGATGAGCTTCACACTCTGGTGGGAGCAGGTGCTGCTGAAGGTGCTA
TTGATGCGGCCAATATTCTCAAACCGGCTCTTGCCCGTGGTGAGCTTCAGGCCATCGGAGCCACTACCCTCGATGAGTAT
CGAAAATATATTGAAAAAGACCCGGCCCTGGAAAGGAGATTCCAGTCCATTCTGGTAGAGGAGCCGACTCCGGAAGAGAC
TATAGAGATTTTGAAGGGGCTACGGGACCCCTATGAAGCCCATCATAAAGTCAAGATAAGTGATGAAGCTATTAAAGCGG
CTGTAAACCTTTCACACCGTTATATTACTGACCGGTTTTTACCCGATAAAGCCATTGATCTTATCGATGAAGCTGCCTCC
AGGGTAAGACTGGGTAGTGATACCAGACCACCTGAATTAAAAGATTTGAATAAAAAGCTGGAAGAGGTAAAAAAAGAAAA
GGAAGCCGCGGTTAAGAATCAGGAATTTGAAAAAGCTGCTGAATTAAGGGATAAAGAAAAAGAACTAGAGAAAGAGTTTG
AAAACATTCAGGAGAAATGGGAAAAAGAAAAAGAAAAGAGTGAAAGTACTGTAACCACTGAGGAAATAGCAGAGATAGTT
TCAAGCTGGACCGGAATACCTGTAACCAAGCTTGAGCAAGCAGAAACTGCCAAACTACTCCATCTAGAAGAAGAGCTGCA
CAAACGGGTAGTTGGCCAGGACGAGGCCATTCAGGCTGTTTCCCAGGCGGTGAGAAGGGCCCGGGCTGGTTTAAAGGATC
CGAAGAGACCGATTGGCTCATTTATTTTTCTTGGTCCTACTGGAGTTGGGAAAACTGAGCTGGCCAGGGCTCTGGCTGAA
GCTATGTTTAATGATGAAGAGACTATGGTAAGAATAGATATGTCCGAATATATGGAAAAACATGCTGTATCAAGACTGGT
AGGCTCACCTCCAGGATATGTAGGACATGAAGAAGGGGGACAGTTAACAGAGCCCATTAGAAGGCGCCCTTATTCTGTTG
TACTTTTTGATGAGATTGAAAAAGCCCATCCCGATGTATTTAATATCCTTCTTCAGATCCTGGAAGATGGTCATTTGACC
GATACCCATGGGCGCAGAGTTGATTTCAAGAATACTGTTGTTATAATGACTTCAAATGTTGGGGCTAATTTTATCGAAAA
GCAGTCAAGGTTAGGCTTTAAAGCCGGAAATGATGAAAAACAAAATTACGAAGATATGAAGGATAAGTTAATGTCAGATT
TAAGGAGGACCTTCAGGCCCGAGTTTTTAAACAGGGTTGATGAAATTATTGTCTTCCATGCTCTAAACAGGGATCATATT
AAGCAGATTGTAGATCTGATGCTGGATGATGTTAAAAAACGCCTTGAGGACAAGGAAATTGATATTGAAGTTACTGAAGG
AGCAAAACATGTTCTTGCTGAAAAAGGGTTTGACTCAGAATTTGGAGCCCGTCCTTTGAGACGAACAATTCAGCGAATGG
TTGAAAACCCATTATCTGAAAAGATCCTGGAAGGAAAAGTTAAAGAAGGGGATAAAGTTGTTGTCGATGAACAGGATGGG
AAAGTAGTCGTGGGCAAATGA

Protein sequence :
MFGRFTERARKVLSLAEKEAVGFKHNYVGTEHILLGLVKEGQGVAAKALKDVGISEEKVKEQITKLIGEGNQEVSGPISL
TPRSKKVLNLALDEARRLGHNYIGTEHILLGLIREGEGVAVRILANLNNGDLQNIREQVIELLGGKGNTRHQDGTRRSET
PNLDEYSRDLTKLADQVKLDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVDESVPDVLLNKRVV
ALDLSSIVAGSKYRGEFEKRLKAVMNDIVKSGNIILFIDELHTLVGAGAAEGAIDAANILKPALARGELQAIGATTLDEY
RKYIEKDPALERRFQSILVEEPTPEETIEILKGLRDPYEAHHKVKISDEAIKAAVNLSHRYITDRFLPDKAIDLIDEAAS
RVRLGSDTRPPELKDLNKKLEEVKKEKEAAVKNQEFEKAAELRDKEKELEKEFENIQEKWEKEKEKSESTVTTEEIAEIV
SSWTGIPVTKLEQAETAKLLHLEEELHKRVVGQDEAIQAVSQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
AMFNDEETMVRIDMSEYMEKHAVSRLVGSPPGYVGHEEGGQLTEPIRRRPYSVVLFDEIEKAHPDVFNILLQILEDGHLT
DTHGRRVDFKNTVVIMTSNVGANFIEKQSRLGFKAGNDEKQNYEDMKDKLMSDLRRTFRPEFLNRVDEIIVFHALNRDHI
KQIVDLMLDDVKKRLEDKEIDIEVTEGAKHVLAEKGFDSEFGARPLRRTIQRMVENPLSEKILEGKVKEGDKVVVDEQDG
KVVVGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hore_00870 YP_002507843.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 64