Gene Information

Name : Hore_10120 (Hore_10120)
Accession : YP_002508763.1
Strain : Halothermothrix orenii H 168
Genome accession: NC_011899
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 1101841 - 1103892 bp
Length : 2052 bp
Strand : +
Note : PFAM: DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG

DNA sequence :
ATGAAGGAGAAAATGCCCAGTAGTGTCCAGTTCGTCAGGGGAGTTGGACCACGGTATGCAGAGGTATTAAAAAAATTAAA
TATTAATACTGTCAAAGACCTCCTGTACTACTTTCCCAGGACTTACCAGGACCGAAGCCAGTTTACTCCCATTAAATATA
TAAGACCAGGTTATGAGGTTACAGTACAGGGGGAAATTATCAAAATTGAGGAAAATAAAATCAGGAAGGGGCTTTCAATT
TTAAAAGCCACCATTACTGATGGTAGTGATGTTCTTAATGGAGTCTGGTTTAACCAGAATTACATAAAAAAACAGCTAAA
AAAGGGCCAGACCTATATTTTTAGTGGTAAACTTAATGAAAAAAGTTTTAGATTTAGAAAAAAAGAAATAAGTAATCCAG
TTTTTGAAAAAGTTGATAAAGGAGACAGTATTCATACCGGAAGAATTGTACCTATTTACCCCTTAACTTCAGGTGTCACT
CAGAAGAGATTAAGGACTATAATTTATAACGCCCTTAATGATTATGCCCATCATTTGACCGATTATTTACCTGGTTTTAT
AAGAAAAAAATATAAATTTCCCGACATTTCCAGGAGTATCTGGGGTTTACATTTTCCTGAAAACCGGGAACATTATATAT
ACTCCAGAAGGCGACTTGCCTTTGAGGAGTTGTTTTTTTTACAGCTCCTTGTTTTAAAACGAAAGAAGGGCATTATTGAG
AGCAGGGGAATCAACCATAAAGATGAGGGGGAGGTAATAAAAAAATTTTTAAAATTACTTCCCTTCAGGTTAACTGCAGC
CCAAAAAAGAGTCTGGAGAGAAATAAAAGCCGATATGGAAAAACCCACCCCTATGCAGAGGTTACTCCAGGGAGATGTCG
GTTCCGGTAAGACTATAATAGCAGCCCTGGCCTTAATTGAAACGATGGCCAATGGTTACCAGGGTGTTTTTATGGCTCCA
ACTGAAATACTGGCTGAACAGCATTACCTTAAACTTAAGGACCTTTTAGAGCCATTAGGATACAGAACCGCCCTTCTGGT
TGGAGGTATAACCGGTTCACAGCGTGAGAATATTGAACGGGGTATTGAAGAAAAGAAAATTGATCTTATAGTAGGCACAC
ATACGCTTTTTCAGGAAAGGATTAATTATTTCAGTTTAGGTCTGGTTGTAATTGATGAGCAGCATCGCTTTGGGGTGGAA
CAACGATTCAAACTTGAGAAGAAAGGGGATAACCCTGATGTTCTTGTAATGACAGCTACCCCTATCCCGAGAACTATGGC
TTTAACAATATATGGTGACCTCGACCTTTCTATAATAGATGAGCTGCCTCCCGGAAGGAGTCCTGTAATTACAACCTGGA
GAACACAAAATTCCAGGAAACGGATTTATTCCTTTGTTAAAGAAAAGTTAGAAGAGGGTCGGCAGGCTTATGTGGTCTGT
CCTGTGATTGAACCCTCTGAAGAGCTTGAAGTAGTTTCAGCGTTGGAAATAAAGGAAAAACTTGAAGATAAATATCTTAA
GGGTTATAATGTTGGTCTGCTTCATGGGAAACTTCCCCCGGAAGAAAAAAAGCAGGTTATGGAGGACTTTCGACAGGGGG
TAATAGATGTTCTGGTTTCTACTACAGTTGTTGAAGTAGGGGTTGATGTTCCCAATGCTACTATAATGATTATTGAAAAC
GCCGACCGTTTTGGCTTGGCTCAGCTCCACCAGTTGAGGGGAAGAGTTGGGAGAGGCAAGTATCAATCTTACTGTATACT
TATCGGTAACCCTACGACTGAAGAAGGGAAAAGAAGGCTTAAAGTTATGACCAGCCTTAATGATGGCTTTGAGATTGCAG
ATGAAGATTTAAAAATCAGGGGTCCAGGTGAGTTTTTTGGGACCAGACAACATGGTATACCTGATTTAAAAGTAGCCAGT
CTTATTAAAGATAAAAAACTTTTACAACTGGCCCGGCAAGAGGCTTTTAATATTATTTACTCTACCCGGGACTGGCAGGA
TAAATATAGAAACCTTAAAGAGAGGATAGATGAACTTGATTTAAAGATTTAA

Protein sequence :
MKEKMPSSVQFVRGVGPRYAEVLKKLNINTVKDLLYYFPRTYQDRSQFTPIKYIRPGYEVTVQGEIIKIEENKIRKGLSI
LKATITDGSDVLNGVWFNQNYIKKQLKKGQTYIFSGKLNEKSFRFRKKEISNPVFEKVDKGDSIHTGRIVPIYPLTSGVT
QKRLRTIIYNALNDYAHHLTDYLPGFIRKKYKFPDISRSIWGLHFPENREHYIYSRRRLAFEELFFLQLLVLKRKKGIIE
SRGINHKDEGEVIKKFLKLLPFRLTAAQKRVWREIKADMEKPTPMQRLLQGDVGSGKTIIAALALIETMANGYQGVFMAP
TEILAEQHYLKLKDLLEPLGYRTALLVGGITGSQRENIERGIEEKKIDLIVGTHTLFQERINYFSLGLVVIDEQHRFGVE
QRFKLEKKGDNPDVLVMTATPIPRTMALTIYGDLDLSIIDELPPGRSPVITTWRTQNSRKRIYSFVKEKLEEGRQAYVVC
PVIEPSEELEVVSALEIKEKLEDKYLKGYNVGLLHGKLPPEEKKQVMEDFRQGVIDVLVSTTVVEVGVDVPNATIMIIEN
ADRFGLAQLHQLRGRVGRGKYQSYCILIGNPTTEEGKRRLKVMTSLNDGFEIADEDLKIRGPGEFFGTRQHGIPDLKVAS
LIKDKKLLQLARQEAFNIIYSTRDWQDKYRNLKERIDELDLKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-84 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hore_10120 YP_002508763.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-87 41