Gene Information

Name : Ccel_0056 (Ccel_0056)
Accession : YP_002504424.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 64293 - 64721 bp
Length : 429 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cth:Cthe_2186 single-strand binding protein

DNA sequence : 
ATGAACAAAGTTTTATTGATGGGTAGACTTACGAAAGATCCAGACCTAAGATACACCAGTGGAAACAATACGGCAGTCGC
GAGTTTTACACTTGCTGTTAACAGACGTTTTGCCAGAGAAGGACAGCCACAGGCTGATTTCATCAATATTGTTGCATGGG
ACAGGAGTGCTGAATTTTGTGGAAAGTATTTCACAAAAGGAATGCAGGTTGCTGTTGTTGGTAGGATTCAGACCAGAACG
TGGGATGATAATGAGGGGAAGCGTCATTATGTTACGGAAGTTGTTGCAGAGGAGACTTACTTTGCAGACAGCAAACGTAA
TAGCGAAGCTGGTAACAGTGGTTCTACACAGAAAACTTATTCTGAAACCCCTGCTGCATCCGGTGATGGATTCTATCCAA
TGGATGAGGATGACGAACTGCCGTTTTGA

Protein sequence : 
MNKVLLMGRLTKDPDLRYTSGNNTAVASFTLAVNRRFAREGQPQADFINIVAWDRSAEFCGKYFTKGMQVAVVGRIQTRT
WDDNEGKRHYVTEVVAEETYFADSKRNSEAGNSGSTQKTYSETPAASGDGFYPMDEDDELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 8e-21 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-20 49
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-19 49
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 2e-26 48
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 6e-20 47
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-17 45
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-20 43
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-20 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 41