Gene Information

Name : Ccel_0557 (Ccel_0557)
Accession : YP_002504919.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 641686 - 642363 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ckl:CKL_3392 hypothetical protein

DNA sequence : 
ATGAGTATATTAAAAACAGATGGATTAAGAAAATACTATGGCAAGGGTGAAAACCTTGTAAAAGCTCTTGACGGCATAAA
TCTGGAAATTCTGGAAGGAGAGTTTGTAGCGGTTGTAGGTACATCAGGAAGCGGTAAATCGACGCTTTTGCATATGCTCG
GGGGACTTGATAAGGCTACAGAAGGTAAAGTAACGGTGGCGGGTAAGGAATTTTTTGATATGAATGATGAGCAAAAAACA
GTCTTTCGCAGAAGAAATATTGGTTTTATATTTCAGAATTACAATCTGGTACCTATACTGAACGTTTATGAAAACATTAC
TCTCCCTGTTGAACTGGATGGAGGAACTATTGATAAAGCATTTATAGACGATATTATTAAAACCCTTGGCCTTGGCGGTA
AGCTTACAAACCTTCCAAACAATCTTTCGGGAGGCCAACAGCAAAGGGTAGCTATAGCTAGGGCTCTGGCAACAAAACCC
GCTATAATCCTTGCAGATGAGCCAACGGGTAATCTCGACAGCAAAACCGGGCTGGAGGTAGTAGGCTTGCTAAAAATGAC
CAGCAAAAGATTCCATCAAACAATTGTTATGATTACACATAATGAAGAGATTGCTCAGTTGGCGGACAGGGTTATCCGTA
TTGAAGACGGTAAAATAGTCGGGGGTGAAGACAAATGA

Protein sequence : 
MSILKTDGLRKYYGKGENLVKALDGINLEILEGEFVAVVGTSGSGKSTLLHMLGGLDKATEGKVTVAGKEFFDMNDEQKT
VFRRRNIGFIFQNYNLVPILNVYENITLPVELDGGTIDKAFIDDIIKTLGLGGKLTNLPNNLSGGQQQRVAIARALATKP
AIILADEPTGNLDSKTGLEVVGLLKMTSKRFHQTIVMITHNEEIAQLADRVIRIEDGKIVGGEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccel_0557 YP_002504919.1 ABC transporter CP001581.1.gene598.p Protein 1e-71 74
Ccel_0557 YP_002504919.1 ABC transporter CP001581.1.gene798.p Protein 2e-51 56
Ccel_0557 YP_002504919.1 ABC transporter NC_012469.1.7686878. Protein 4e-30 44
Ccel_0557 YP_002504919.1 ABC transporter NC_012469.1.7685735. Protein 9e-31 43
Ccel_0557 YP_002504919.1 ABC transporter NC_008702.1.4606598. Protein 1e-26 42