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Name : Ccel_0354 (Ccel_0354) Accession : YP_002504719.1 Strain : Clostridium cellulolyticum H10 Genome accession: NC_011898 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 407009 - 409165 bp Length : 2157 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: cth:Cthe_1955 RNA binding S1 DNA sequence : ATGACAGACATAGTCGGGCAGTTAATCAGGGAATTCAACTTGAAGCCTTTTCAGGTGCAAAATACAGTTAAACTTATAGA TGAAGGAAATACAATACCATTTATAGCTCGTTATAGAAAAGAAGTTACGGGAGAACTTAACGACCAGGTTTTAAGAGAGC TTAACGAGCGCTTAGTGTATTTAAGAAATCTGGATGAACGGCGGGAAGATGTAAGAAGGCTTATAGAGGAGCAGGGCAAA CTTACGGAAGAAATAGTGAAATCTCTAGATTCAGCCATGACACTACAGGAAATAGAGGATATTTACAGACCTTACAAGTT AAAAAGGAAAACACGGGCATCTGTTGCCAGGGAAAAAGGTCTTGAACCCCTTGCTACCATTATATATTCACAGCTTCCAA CAAAAACTTCTATAAATGAAATTGCTTCAAGGTATATTAACGAGGAAAAAGGAATAAACAGTGTGGATGAAGCTATTAAA GGAGCTTTAGATATAATAGCCGAGGAAGTTTCCGATAATGCTGAATTCAGAAAGGTTTTAAGAGAAATAATATTTAAAAA TGGCCTTGTAATGTCTTTCGGTAAAAAGGATGAGGACTCTGTATACAGAATGTACTATGATTTTAAGGAACCCGTATCAA AGATAGCAAGACATCGAGTTCTTGCCTTAAACAGGGGGGAGAAGGAAGATTTCCTGAGTGTAAAAATAGATTTAAACGAG GACTTGTGTCTGAATTTTTTAAAGTCTAACACTCTTAAAAACACAAATACTGAAATGTCTAAATATGTTGAATCCGCTGT TGAGGATTCTTTTAAAAGACTGATTTTTCCGTCTTTGGAGAGGGATATACGCAATCAGCTTACGGAGTTAGCTGAGGATC AGGCTATAAAGGTATTTTCCGAGAATCTGAGGAACCTTCTGCTTCAGCCGCCTGTCAAGGACAGGGTGGTACTTGGTCTT GACCCGGCATACAGGACAGGTTGTAAGCTGGCAGTAGTGGATGGAACGGGTAAAGTGCTGGAGACTACCGTTATCTATCC GACTCCGCCTCAGAACAAAATAGATGAGGCAAAAAAGAAAGTAAAAGAACTTATTAAAAAGTACGAAGTTGACATAATTT CAATTGGAAACGGTACAGCCTCCAAGGAATCTGAGATATTTGTAGCTGATTTGCTGAAGGAAATAGACAGAGAGGTTTAC TATATGGTGGTAAGCGAGGCGGGTGCATCGGTATATTCGGCCTCGAAGCTTGGTGCGGAAGAATTTCCGGATTTTGACGT TGCTCTCCGAAGTGCTGTTTCCATTGCAAGAAGGCTTCAAGACCCTCTGGCAGAGCTGGTAAAGATCGACCCTAAAGCAA TCGGGGTTGGACAATACCAGCATGATATGAACCAGAAAAGACTTGATGAGTCTCTTGGCGGAGTGGTAGAGGATTGTGTA AACAATGTGGGTGTTGATTTGAATACAGCTTCTGCACCTTTACTTTCTTATGTTTCAGGGATAAGCACTGCAATTGCAAA GAATGTTGTTGAGTACAGAGAGGAAAACGGAAAATTTAAGGCAAGAAATGAACTAAAAAAGGTAAAGAAGCTTGGAAACA AGACATTTGAACAATGTGCAGGCTTTTTAAGAATAACAGATGGTGAAAACATTCTTGATAATACGTCCGTTCATCCCGAA TCATATAAAGCAGCAAAGCTCCTTTTGGAGAAGATGGGCTATTCTTTGGAAGATGTGAGAGCAAAAAAACTTTCAGGACT TGACAATAAGGTTCAGCAGGCAGGAATGTCTCGTATAGCAGAGGAACTAGGTATTGGTGTACCGACCTTAAAGGATATAA TAAATGAACTGCTAAAGCCGGGAAGAGACCCCAGGGACGAATTGCCAAAACCAATGCTTCACTCGGATGTACTTCATATG GAGGACCTGAAACAGGGAATGATACTCACTGGAACGGTAAGAAACGTAGCTGATTTCGGTGCTTTTGTTGATATAGGAGT TCATCAGGACGGACTTGTGCATATATCTCAGCTGGCTGACAAATATGTTAAAAATCCCATGGATGTAGTTGCTGTGGGGG ATATAGTAAAAGTCAAGATTCTTGAAGTGGATGTTGAAAGAAAGAGAATATCCCTTACTATGAAAGAAATAAACTAA Protein sequence : MTDIVGQLIREFNLKPFQVQNTVKLIDEGNTIPFIARYRKEVTGELNDQVLRELNERLVYLRNLDERREDVRRLIEEQGK LTEEIVKSLDSAMTLQEIEDIYRPYKLKRKTRASVAREKGLEPLATIIYSQLPTKTSINEIASRYINEEKGINSVDEAIK GALDIIAEEVSDNAEFRKVLREIIFKNGLVMSFGKKDEDSVYRMYYDFKEPVSKIARHRVLALNRGEKEDFLSVKIDLNE DLCLNFLKSNTLKNTNTEMSKYVESAVEDSFKRLIFPSLERDIRNQLTELAEDQAIKVFSENLRNLLLQPPVKDRVVLGL DPAYRTGCKLAVVDGTGKVLETTVIYPTPPQNKIDEAKKKVKELIKKYEVDIISIGNGTASKESEIFVADLLKEIDREVY YMVVSEAGASVYSASKLGAEEFPDFDVALRSAVSIARRLQDPLAELVKIDPKAIGVGQYQHDMNQKRLDESLGGVVEDCV NNVGVDLNTASAPLLSYVSGISTAIAKNVVEYREENGKFKARNELKKVKKLGNKTFEQCAGFLRITDGENILDNTSVHPE SYKAAKLLLEKMGYSLEDVRAKKLSGLDNKVQQAGMSRIAEELGIGVPTLKDIINELLKPGRDPRDELPKPMLHSDVLHM EDLKQGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKYVKNPMDVVAVGDIVKVKILEVDVERKRISLTMKEIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 9e-147 | 47 |
