Gene Information

Name : Ccel_3087 (Ccel_3087)
Accession : YP_002507359.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3621322 - 3621744 bp
Length : 423 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cth:Cthe_2186 single-strand binding protein

DNA sequence : 
ATGAATAATGTCAGTCTTGTGGGAAGGTTAACAAAGGATGTTGATCTTAGGTATACCACCAAAAAAATGAGAGCGGTGGG
ATCATTTACGTTAGCTGTAGACCGGGATCTCAGAAAAGTAACAAATGGTAAAACCGCAGATTTTATACCGATTGTTACCT
GGGGAAAAACTGCTGAGTTTGCAAGCAAGTACTTTTCAAAGGGTCACCGTATAGCCCTTCAGGGAAGCATACATACTAGG
GTTTGGGAAGATGAGGATAAAAACAGGCACTATGTTACCGAAGTTGTCGCAGACAGGGTATTTTTTGCTGATGCAAAGCA
AAGGGAATTCGATGAACCGGGTGAGGAGGAGTTGAAAGAGGCTAAATATGAACAGGAAATAGAAGAATTAGACGAGGAAG
TTTTATCAGGAGATAAAGCGTAA

Protein sequence : 
MNNVSLVGRLTKDVDLRYTTKKMRAVGSFTLAVDRDLRKVTNGKTADFIPIVTWGKTAEFASKYFSKGHRIALQGSIHTR
VWEDEDKNRHYVTEVVADRVFFADAKQREFDEPGEEELKEAKYEQEIEELDEEVLSGDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 8e-16 46
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 6e-16 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-16 45
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 4e-15 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 6e-15 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 2e-14 43
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 3e-14 43
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 5e-13 42