Gene Information

Name : Ccel_3062 (Ccel_3062)
Accession : YP_002507334.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 3606409 - 3608367 bp
Length : 1959 bp
Strand : -
Note : PFAM: DNA-directed DNA polymerase; KEGG: drm:Dred_1191 DNA-directed DNA polymerase

DNA sequence :
ATGAAAAAGATATTATCGATAGATATCGAGACCTACAGCAGTGTAGACCTTATAAAATGTGGGGTATACCGGTACGTTGA
AGCTCCTGACTTTGAAATACTTCTGTTTGCATATGCGTACGATGATGAACCTATAACTGTTATAGACTTGGCAGACTTCG
AAGAGTTACCGGAACAAGTAACGAAAGACCTTACAGATCCAGACGTAATAAAAGCTGCCTATAATGCTAACTTTGAAAGA
ACCTGTATAGCTAAATTCTATAATAAGCCAATGCCTCCAGAGCAATGGAGATGTACGTCGGTTCACGCTTTAACTTTAGG
GCTCCCGGGCAACCTTGACGGAGTGGCTAAGGTTCTCGGGCTTGATGCACAGAAGGACACTGCAGGAAAGAACCTTATAA
AATACTTCTCAGTTCCCTGCAAGCCTACAAAAGTAAATGGTGGTAGGACCCGTAACTTTCCACACCATGCACCTGATAAA
TGGAAGCAGTTCAAGGACTATTGTAAACAGGATGTTGTTGTTGAAAGGGCGATAAGAAAGAAAATAGAAAAATACCCTGT
TCCAGAACATGAGTGGAAGCTCTGGACTTTGGATCAGAAAATTAATGATGCAGGTGTAAGACTTGATCCAGTATTAGTCC
AGCAAGCTTTAAAGTGTGATTTACAGTATGCAACAAGACTTGATGCAGAGGCAAAGGAACTGACAGGCCTTGATAACCCG
AATAGTACTACTCAATTAACTGTATGGCTTAAAAAACAAGGATTGACTGTAGATAACGGGCTTGGCAAAGACTATATACC
CGGGTTATTAGATCAGGCTAAGGGCGATGAGACAGTAACCAGAATGTTGGAGCTCCGGAAAGAAATGTCTAAAACTAGCA
CTAAGAAGTATGAGGCTATGGAACGGGCAATGTGTTCGGATGATAGGGCAAGAGGATTATTGCAATTCTGTGGGGCTAAT
CGTACATGGCGCTGGGCGGGAAGATTAATTCAAGTTCAGAACCTGCCACAGAACAAAATTCCTGATTTGGGAGTAGCTCG
AGAGTTGTTACATAGTGGTAAATTTGAGGCAATAGAACTTCTTTTTAATAGCCCGCCGTTTGTGTTATCACAGCTAATTA
GAACAGCTTTCATTCCTTCTGACGGTTGCAGGTTTATTGTGTCGGACTTCTCGGCCATCGAGGCCAGAGTAATAGCTTGG
TTAGCAGGAGAGTCGTGGCGAATGAAGGTATTTAAAAGTCATGGGAAGATATATGAGGCTTCTGCATCCCATATGTTTCA
TGTACCCATAGAGGAGATTACTAAAGGAAATCCACTTAGGCAAAAAGGAAAAATCGCAGAACTTGCTCTCGGATATGGTG
GTAGTATTGGAGCCCTTGAAGCAATGGGTGCACTTAAAATGGGGCTTGATGCAGATGAGCTTCCAGACCTTGTCACAGCC
TGGCGTAACTCAAACCCTAAAATCGTTAAGCTTTGGTGGGACGTCGATAAAGCTGCTATGACAGCTGTGCGAGAACACAT
GCCTGTTAGAATTCAGTACGGTATTACCTTCTCTTATAAAGATGGGTTTTTATTTATTAAACTACCATCGGGGCGAAAAC
TGGCTTATGTAAAACCCAAAATAAAGGATGGTAAATTCGGACGTCCTGCACTTACATATGAGGGAATGGACCAGATAAAA
AAGACTTGGGAACGTATAGACACCTATGGCCCCAAGTTGGTTGAGAATATTGTGCAGGCTGTAGCGAGGGATTGTTTAGC
AGTTAATATGCTAAGACTCGACGATGCAGGATATGACATAAGAATGCATGTACACGACGAAGTAATATTGGACGTACCTA
ATACCGATACAGATGCTCTTGCACAAGTAAACGAAATAATGAGTCAGCCTATAGATTGGGCTCCTGGGTTACCTCTCAGG
GCAGATGGATATGAAACTGAATTTTATAAAAAAGATTAG

Protein sequence :
MKKILSIDIETYSSVDLIKCGVYRYVEAPDFEILLFAYAYDDEPITVIDLADFEELPEQVTKDLTDPDVIKAAYNANFER
TCIAKFYNKPMPPEQWRCTSVHALTLGLPGNLDGVAKVLGLDAQKDTAGKNLIKYFSVPCKPTKVNGGRTRNFPHHAPDK
WKQFKDYCKQDVVVERAIRKKIEKYPVPEHEWKLWTLDQKINDAGVRLDPVLVQQALKCDLQYATRLDAEAKELTGLDNP
NSTTQLTVWLKKQGLTVDNGLGKDYIPGLLDQAKGDETVTRMLELRKEMSKTSTKKYEAMERAMCSDDRARGLLQFCGAN
RTWRWAGRLIQVQNLPQNKIPDLGVARELLHSGKFEAIELLFNSPPFVLSQLIRTAFIPSDGCRFIVSDFSAIEARVIAW
LAGESWRMKVFKSHGKIYEASASHMFHVPIEEITKGNPLRQKGKIAELALGYGGSIGALEAMGALKMGLDADELPDLVTA
WRNSNPKIVKLWWDVDKAAMTAVREHMPVRIQYGITFSYKDGFLFIKLPSGRKLAYVKPKIKDGKFGRPALTYEGMDQIK
KTWERIDTYGPKLVENIVQAVARDCLAVNMLRLDDAGYDIRMHVHDEVILDVPNTDTDALAQVNEIMSQPIDWAPGLPLR
ADGYETEFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 3e-159 54
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 2e-163 53
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 6e-164 52