Gene Information

Name : Ccel_2658 (Ccel_2658)
Accession : YP_002506961.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3204493 - 3205197 bp
Length : 705 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbk:CLL_A1387 regulatory protein VanR

DNA sequence : 
ATGGAAAAGTACAATATACTGGTTATTGATGATGATAAAGAGATAGTGGAATTGATCAGAATATATCTCCAAAATGAGGG
CTACAATGTTTTGGTGGGATTTAACGGTGATGAAGGTGTGGAAATTCTTGCAAAACAAAAAATACACCTTTTAATACTTG
ACATTATGCTGCCTGGAGAAGATGGTTTGCAGATATGCCGGAAAATTAGAGAATCATATATTATACCAATTATTATGGTC
AGTGCAAAATCATGTGATATGGATAAAATTATGGGTCTTGGTACCGGTGCTGACGATTATTTAGCCAAACCCTTTAACCC
AATGGAACTCATGGCAAGAGTCAAATCACAACTGAGACGTTCTTTCTATATGAACACTCAAGTACTGGATAAACAGCATG
ATGAAAACATAATTAATATCTGTGGTTTATCTATAAACAAGAATAATCACACAGTATCTTTACTCGGAAATATAGTTGAT
CTTACACCGACAGAGTACGAAATATTGCTTTTGCTTGCTGGCAGCCCTGGTAAGGTTTTTAGTGTGGAAAAAATATTTGA
AAGCGTTTGGAAACAAAAATTCTATGAATCGAATAATACCGTAATGGTTCATATTTGGAGAATGAGAGAAAAATTGGAAT
CAAATCCTAAAGAACCTAAAATTATAAAAACAATTTGGGGAGTAGGATATAAAATTGAGGGCTAA

Protein sequence : 
MEKYNILVIDDDKEIVELIRIYLQNEGYNVLVGFNGDEGVEILAKQKIHLLILDIMLPGEDGLQICRKIRESYIIPIIMV
SAKSCDMDKIMGLGTGADDYLAKPFNPMELMARVKSQLRRSFYMNTQVLDKQHDENIINICGLSINKNNHTVSLLGNIVD
LTPTEYEILLLLAGSPGKVFSVEKIFESVWKQKFYESNNTVMVHIWRMREKLESNPKEPKIIKTIWGVGYKIEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-38 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccel_2658 YP_002506961.1 transcriptional regulator AM180355.1.gene1830. Protein 8e-54 53
Ccel_2658 YP_002506961.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 8e-55 53
Ccel_2658 YP_002506961.1 transcriptional regulator NC_014475.1.orf0.gen Protein 3e-51 49
Ccel_2658 YP_002506961.1 transcriptional regulator AF130997.1.orf0.gene Protein 1e-52 49
Ccel_2658 YP_002506961.1 transcriptional regulator NC_005054.2598277.p0 Protein 3e-51 49
Ccel_2658 YP_002506961.1 transcriptional regulator AF155139.2.orf0.gene Protein 2e-57 48
Ccel_2658 YP_002506961.1 transcriptional regulator AF162694.1.orf4.gene Protein 3e-49 48
Ccel_2658 YP_002506961.1 transcriptional regulator EU250284.1.orf4.gene Protein 2e-51 47
Ccel_2658 YP_002506961.1 transcriptional regulator FJ349556.1.orf0.gene Protein 3e-54 45
Ccel_2658 YP_002506961.1 transcriptional regulator AF253562.2.orf0.gene Protein 2e-37 42
Ccel_2658 YP_002506961.1 transcriptional regulator NC_012469.1.7685629. Protein 9e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccel_2658 YP_002506961.1 transcriptional regulator VFG1563 Protein 1e-38 42
Ccel_2658 YP_002506961.1 transcriptional regulator VFG1702 Protein 8e-38 41